| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3315 |
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| Symbol | |
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| ID | 1222179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3577002 |
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| End bp | 3579365 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239732 |
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| Product | putative prolin-rich transmembrane protein |
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| Protein accession | NP_521434 |
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| Protein GI | 17548032 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG3115] Cell division protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.534129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.208628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCA CTTCCTGCCG TACCGGCCGT CTCTCCGGCC TGCGGCTGCC ACGCGTCCTG
CGGGCAGCGA GTCTCGCCGC CGTCCTGCTG GTGTGCGGCA CGCAAGCCGC GCTGGCCACC
GACCCTGCCT CGCGCGTGGC GCGCCTGTCG GACTTCTCCG GCGCCGTCAG CTTCGCACCC
GCGGGCTCCG ATGACTGGGC CGCCGCCACG CTCAACCGCC CCTTCACCAC CGGCGATCGC
CTGTGGTCCG ACCAGGGCGG CCGCACCGAA CTCCACGTCG GCTCCACCGC GCTGCGCCTT
GGCCAGAACA CCGGCGCCAC GCTGGTCGAC CTGGACAACC GCACCACGCA GGTCAAGCTC
ACGCAGGGCG CGCTGTCGGT ACGCGTGCGC GCGCTGCCGC CGGATCAGAT CGTGGAAATC
GATACGCCCA ACCTGGCCTT CCAGGTCCAG GCACCCGGTG AATACCGGCT CGACGTCGCG
CCGGATGGCT CGACCACCAC GGTGACCGTC TGGCGCGGCA ACGGCACGGT CTACGGCGAC
GATCGCTCGG CGCCGCTGGC CGCCGGCCAG CAGGTCCGCT TCGGCGGCAC TGACCTGGCG
GAAGCCGGGG GCACCGACTA TCCCGGCCGC GACGCGTTCG ATCGCTGGGC CGAAGCGCGC
GATGCGCACG AGGATGCCTC GGTCTCCGCG CGCTATGTCG GCCGCGAAAT GACCGGCTAC
GAAGCGCTGG ACGAGTACGG CACGTGGCGC GAGGAAGACG GCTACGGCGC GGTGTGGGTA
CCGCATGCCG TGCCGGTCGG CTGGGCGCCG TATCGCACCG GCCATTGGGC CTGGATCGCC
CCATGGGGCT GGACCTGGGT CGACGATGCG CCATGGGGCT TCGCGCCGTT CCACTATGGC
CGCTGGGCCT ACGTGGGCAC GACGTGGTGC TGGGTGCCGG GCCCCGTGGT GCCGCGGCCG
GTCTACGCCC CCGCGCTGGT CGCCTTCGTG GGGGGCGGTG GCGGCGGCGT GAGCTGGGGC
ATCAACATCT CGATCGGCTC GCCGGGCGTG GCGTGGTTTC CGCTCGCGCC GGGCGAAGCG
TATCGCCCCG TCTACGCAGC CAGCCCGACC TACGTGACCA ACATCAACCG CACGGTGGTG
GTCAACAACG TCACGGTCAA CAAGACCATC ATCAACAACG TGACCAACGT CAACCGCGTC
ACGTACATCA ACGCCAACAA CCCGGCCGCA CTGACGGCGG TGCCTGCCAA GACCTTCGTC
AGCGGCCGGC CGGTCGGCCC GGCAATGACG ACCTTGCGGC CCGAACAGAT GCGCGCGCAG
CTGACGCATG CGCAGTTCGT CTCGACACCG GCGCTGGCCC CCGTCAAGAC CAGCCTGGTC
GGTGCGGCCG CCGCCAGCGG ACCGCATCCG CAGCCGCCGA CGCAGGTCTT CTCGCGGCAG
GCCCTCGCCG TGCGCGCGCC GCAGGCTCCG GCGGGCGGGC ACGATCCGCT GGCCGAGCGC
TTCCGCTCGC AGGGCGGCGC GCTGCCCGGC ACGGGGCCGG CTTGGGTGGG CGGCAATGCC
GCGCGGGTCG CCCCCGCGCG CGGTCCTGCC AATGTGGGGG CGCAGCCGAT GCCGGCCGCC
GCGCAAGCCG CGGGCTTGCG GCTGACACGC GCCACGCCGG CCGAGATGCC GCGTCCGGGC
AATGAGCCCG TGCCCGGCGT TCCGCACGGT CCCAATACAC CGGCCACCCC GGGTGGCCCG
GGCAATCCGC AGGCACACGG TGCACCGGCC TCACCCGCTC CGCAGGCACT GATGGCGCCC
GCAGCGCCGG GTACGACCAC CCGACCCGGG CAGCAGTCTG GCGCCATGCC GATGCCGGAA
CATCGCGGCG AAGCGCATCG GGGGCCGGAT GTGCCTGCGC AAGCCGTGCA TGCGCCACCG
CAGGGGCCGG CGGGCACGAC GACGCGTCCG CCGCAGCCCG AAAGCATGCC GGGCACCCCA
CGCGAGGAAC GTCGGCCGAT GCCTTCGGCG CAACAAGAGC GTCCGCGCAG CGAGCCGCCG
GCACAGGCTC GCCCCGAGCC GCAACCGCAC CCGGCGCCAG TCCCGGTGCC GCATCAGCCC
GAAGCGCGCA TCGAAGCACC TCGCCCGATG CCGCAGCCGC ACCCGGTGGA GATACGCCCG
CCGCAACCCC AGCCACAACC ACAGCCGCAC GTGGTCGAAA TGCGTCCGCC GCAACCGCAA
CCTCAGCCGC GTCCGGAGGT ACGCCCACCG CAGCCGCCGC AGCCACCCCA ACCGCGCGTG
GAGCACCATG AGGCAGCCCC GGCCCAGCCG CACCCGCAGG CTGGCCACAA CGAAGCACAG
CAGCGCGACA CTGACCACCG TTGA
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| Protein sequence | MTITSCRTGR LSGLRLPRVL RAASLAAVLL VCGTQAALAT DPASRVARLS DFSGAVSFAP
AGSDDWAAAT LNRPFTTGDR LWSDQGGRTE LHVGSTALRL GQNTGATLVD LDNRTTQVKL
TQGALSVRVR ALPPDQIVEI DTPNLAFQVQ APGEYRLDVA PDGSTTTVTV WRGNGTVYGD
DRSAPLAAGQ QVRFGGTDLA EAGGTDYPGR DAFDRWAEAR DAHEDASVSA RYVGREMTGY
EALDEYGTWR EEDGYGAVWV PHAVPVGWAP YRTGHWAWIA PWGWTWVDDA PWGFAPFHYG
RWAYVGTTWC WVPGPVVPRP VYAPALVAFV GGGGGGVSWG INISIGSPGV AWFPLAPGEA
YRPVYAASPT YVTNINRTVV VNNVTVNKTI INNVTNVNRV TYINANNPAA LTAVPAKTFV
SGRPVGPAMT TLRPEQMRAQ LTHAQFVSTP ALAPVKTSLV GAAAASGPHP QPPTQVFSRQ
ALAVRAPQAP AGGHDPLAER FRSQGGALPG TGPAWVGGNA ARVAPARGPA NVGAQPMPAA
AQAAGLRLTR ATPAEMPRPG NEPVPGVPHG PNTPATPGGP GNPQAHGAPA SPAPQALMAP
AAPGTTTRPG QQSGAMPMPE HRGEAHRGPD VPAQAVHAPP QGPAGTTTRP PQPESMPGTP
REERRPMPSA QQERPRSEPP AQARPEPQPH PAPVPVPHQP EARIEAPRPM PQPHPVEIRP
PQPQPQPQPH VVEMRPPQPQ PQPRPEVRPP QPPQPPQPRV EHHEAAPAQP HPQAGHNEAQ
QRDTDHR
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