| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3255 |
|---|
| Symbol | |
|---|
| ID | 1222119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3510794 |
|---|
| End bp | 3511435 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637239672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_521374 |
|---|
| Protein GI | 17547972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGAT CGACCCTCAT CCTCGCCCTG GCCTGCGTGG CCGGCATGGC ACACGCGGCG
GATGCCGCCG TCGCCCCGCC CAAGCCCGAC GCGCGTGCCG ATGCCGCGCT CGCCGGGGCG
ATCCGCGACG GCTTCGTCTC CAGGGGCCCG GCCACGGTGG AAGGCGTGAC CGAGCGCGAC
GACGTGCAGA AGACCTGCAG CCAGTACGCC GACCGCAGCA CCGTGCCCGC CGAGGTGGCC
GCCCGGCTGC AGGACGCCCA GCTCAAGACC ATCCGCTACC CGCAGGACGG CAAGTGGCTC
GGCGACTGGA AGGCCGGCGA GCAGATCGCC CAGAGCGGCC GCGGCATGCA GTTCTCCGAT
CCGGCCGGTA CCGTCAACGG CGCCAACTGC TATGCCTGCC ACCGGCTGTC GAAAGACGAA
GTGTCGTACG GCACCATCGG CCCGTCGCTG TATCAGTACG GCAAGCTGCG CGGCGATTCG
GAGGCGATCC TGCGCTACAC CTGGGGCAAG ATCTACAACT CCAACGCGTA CGCGGCGTGC
TCCAGCATGC CGCGCTTCGG GCATAAGGGC ATCCTGACCG AGCAGCAGAT CCGCGATGTG
ATGGCGCTGC TGCTCGACCC GGCCTCGCCG GTCAACCAGT AG
|
|---|
| Protein sequence | MFRSTLILAL ACVAGMAHAA DAAVAPPKPD ARADAALAGA IRDGFVSRGP ATVEGVTERD
DVQKTCSQYA DRSTVPAEVA ARLQDAQLKT IRYPQDGKWL GDWKAGEQIA QSGRGMQFSD
PAGTVNGANC YACHRLSKDE VSYGTIGPSL YQYGKLRGDS EAILRYTWGK IYNSNAYAAC
SSMPRFGHKG ILTEQQIRDV MALLLDPASP VNQ
|
|---|
| |