Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3218 |
Symbol | |
ID | 1222081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3478079 |
End bp | 3479560 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239636 |
Product | hypothetical protein |
Protein accession | NP_521339 |
Protein GI | 17547937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0359272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCT TGATTACAAC GTGGCCGCGC CGGCTGGGCG TGGCATTCGG TATTCTGGTT CTATCAACGG GCTTGATGCT GGCGTGGATG GTGCATGCCG AGCAGACGAG CGCCCGCATT TACAGCGATG AGGAATTGAT GAAGCGACTG GTGATCATGC CGGCCCTGCT GGCCTTCGCG GTGTTCTTGC TGAGTACGGC GTTCATGCAA CGCTCCGCGC TAGCGGCCAC GCCCAAGGCG GAAGCCGCGC CCGCGGCAGT GGAGCCGGCC AAGCCCTTCA TGGCACAAGT GGTCGGCTTG GAATGGCTGA ATCCGCTGCA GCGGCGCGAC TATCCGACCG AGTGGCAATT GCTGTGGACG CTGGGGCTGG TGAAGCCCAA CAAGAATGAC GATATGGTGC GCACGGACCC CAAGAAATTC ACCACCTTGC AGCCTATAGC CGGGATTGCG TTCGGCAATT GGGGGAAGGA ATCATTCGAC GGTTATTACG AGAAATACAT CACCAAGCTG ATGGTGCTGC TCCGTCAGCG TTACCTGATG AACCCGAGCT ATTTCTATAC GGTGGCCTCG AAGGACCGCA AGGATTGGCG GGAACTGGCG GGCGTCCATG TTGAGTTGGC CGTTCCTGCG AAACGGCTTG ATCTGGTCGA GACGCAGACC TATCTGCAGA AAGAAATGGT CAGCTTCTTC GAGATCGGCA ACCGCTCCGC CCCCGACCTG TGGAGCCGCG ACACGCCCCC CGATGTACGC ATCACCCAGG GCGGCGCCAA CGCCGGTTTC ACCTCGCTCA ACGCCGCACT CGACTACCTG CAAGCCCACC CGCAGGAAAG CGTGTGGGTG ATGAACTGGG ACGCGCCCAG CTTCCCGCCC AACGATGAAC AGCTCAACGA AAACCTCGCC GTGCTGTTCC TCGCCGGCCC GGACCTGAAG ACCGAGCGCG ACCCGCTGGC CTGGATCGGC CGCGCCGCCA CCGGCAACAT CAACGGCCAC GAACGCAAGG CCGGCACCAC CCGCGTGATC CAGGCATGGA AGGCGACCAT CGAGGCCGCC GCGAAGAACG CGGGCCACGG CATCGAGGAC ATTCACTACA CCATCCATGA CGCGGGCAAG GGTTCGGATG CCGCATCGGA ACGCCTTGCG GGCCTGAGCC GCACGCTCAC CGAAACGATG CTGGAGTTCG ACTACCAGAA GCAGACCTTC AACACGGCGG GCCTGCTGGG CGACATGGGC GCGGGCTCGG CGCTGACCAA CATGGCCTTG GCGATTGCCC GCGCCAACCA CCTGGGCGGC AGCGTGCTGG TGGCCGGCAC GACCGATCCC GAGCACCCCA CCGCCGTGGT GGTGGCCCCG CCGTCCAAGC TCACACCCAT CGACCCGGAC AAGGACTGGT TCCGCGCCCG TGGCGAGAAC AACGCGTACT TGCCGTGGTG GGGCCATCGC CATGGCGAAA GCTACGGCAC CGTGCAGGGC TATTCCTGGT AA
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Protein sequence | MKVLITTWPR RLGVAFGILV LSTGLMLAWM VHAEQTSARI YSDEELMKRL VIMPALLAFA VFLLSTAFMQ RSALAATPKA EAAPAAVEPA KPFMAQVVGL EWLNPLQRRD YPTEWQLLWT LGLVKPNKND DMVRTDPKKF TTLQPIAGIA FGNWGKESFD GYYEKYITKL MVLLRQRYLM NPSYFYTVAS KDRKDWRELA GVHVELAVPA KRLDLVETQT YLQKEMVSFF EIGNRSAPDL WSRDTPPDVR ITQGGANAGF TSLNAALDYL QAHPQESVWV MNWDAPSFPP NDEQLNENLA VLFLAGPDLK TERDPLAWIG RAATGNINGH ERKAGTTRVI QAWKATIEAA AKNAGHGIED IHYTIHDAGK GSDAASERLA GLSRTLTETM LEFDYQKQTF NTAGLLGDMG AGSALTNMAL AIARANHLGG SVLVAGTTDP EHPTAVVVAP PSKLTPIDPD KDWFRARGEN NAYLPWWGHR HGESYGTVQG YSW
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