| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2432 |
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| Symbol | |
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| ID | 1221279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2637302 |
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| End bp | 2638957 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238833 |
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| Product | hypothetical protein |
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| Protein accession | NP_520553 |
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| Protein GI | 17547151 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC CCGCCCGCCC GCCTCAAGTC CGCGTCCGGC ACATCGTGCG GGTGGGGCTG
GCGTTGTCGA TGCTGCTGGC GGGCGCCGCC CTGTGCTGGT TCGCCGCAGG CATGGTGGCG
GATGCGATGG GTGCGCGCGA GCTGCGGCAG ACGTTCGATG CGCGCCGCCA GCTGGCCGAG
CAAGTGGCCG ACGGGATGGC CAGCCAGATC ACCGCCGACG TGGCGCTGCT GCGCGCCGTG
CCGCTGACGC TGGCGGAGAT CGAGTCGATT CCTGCCGGCG TGGCGCGCGT CGATACGCGC
CGCTGGAACC TGATGGATGA AGGCTTGCGC CTCAAGGAGG CGACGGCCCA TCCCGAGGTG
CGGGCCGCGA GCACGTTCCT GAGCGTCGCC AACGGCAATC TCGGGCTGGA CTACACCTGG
GTGGTCGACA CGCGCGGCTA CGTGGTGCTG GCCAGCAACG CGGGGCGGCC CGGTTCGTTC
ATCGGCATGC AGTTGGCGCT CCAGCCGTAC ATGAAGGCGG CCATGCTGGG CGGCCTCGGC
GAGCAGTTCA CTGTCGGCCC GATTACGGGC GTGCCGGGGC TGTTCTTCGC CGCGCCGATC
TACGATGCCC AGGGCCGCCT GGTGGCGGCG ATCGGCACTA AGCTCAACCT GTCGCGCCTG
CAGCACTGGG TGTCGCACCC GACCTCGCTG GTGGCGGACG CGAACGGGCT GATCATCCTG
TCGACCGACG CCTCGCTGGT GGGCAAGGCG CTACCCGATT CGCGCGTGCA GCGGATGACG
CCGTCCGAGC GCTTCACCGA GTACCAGCGG GTGGATTTCG AGCCGTGGTC TTACCAGGCG
GCCGCATCGG CGCAGCGGGC GGTGCCGTCG TGGGTTCCCG CCGATGTGCG CGATGCCATG
GTGTGGCGCG CGGGCAGTGA GATCCCCTCG CTGACAGTCT CGCGCACTGC CAGCGCAGAC
CTGACCGTGA TGGTGGCGGA GCCGTTGGGG TCGTGGTCGT ATCAGTTGGC CACCCACGAG
CGCAATCGCT CGCTGGGTTT CGTGCTGTTC CTCAGCGGGC TGCTGGTCTT CGTGCTGGTG
GTGTGGTCCC TGCTGCGGGA GCGCCAGCAC CATCGCGTGA CCCGCCACCT CAATCAGAGC
CTGCAGCGCA CCAACAGCGC GCTCGCCAAC GAAGCCCATT TCGACCACCT GACCGGTGTG
CTGACGCGGC GGCGCTTTCT CGCCCTGTTC GAAACCGTGC TGACACGCAC CCATGTGCGC
GGCGAGCAAC TGGTGCTGGT CCTGGCGGAC CTGGACCACT TCAAGCGCAT CAACGACACC
TGGGGCCATG CGGTGGGGGA TCTCGCCCTG CAGCGCTTCG CCTCGCTCGC CACCAGCGTG
ATGCGCAGCA GCGACCTGAT CGGCCGGCTG GGCGGCGAGG AGTTCGCCGT GGTCATGGGC
CGCACCACCC TCGAAGAGGC GGCCGGCGTG GTCGAGCGCC TGCGCGCGGC CGTGGCCGAA
GCGGACGCAT CCCTGCCCAG CGGACTGGCC ATGACGGTGA GCCTCGGCAT GACGGCCTGC
CACACCGGCG ACACCGCTTC GGAGATGCTC AGGCGCGCCG ACCTGGCGCT CTACCGCGCC
AAGGAAAGCG GGCGGAACCG GCACGCGGCG GGTTAG
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| Protein sequence | MAKPARPPQV RVRHIVRVGL ALSMLLAGAA LCWFAAGMVA DAMGARELRQ TFDARRQLAE
QVADGMASQI TADVALLRAV PLTLAEIESI PAGVARVDTR RWNLMDEGLR LKEATAHPEV
RAASTFLSVA NGNLGLDYTW VVDTRGYVVL ASNAGRPGSF IGMQLALQPY MKAAMLGGLG
EQFTVGPITG VPGLFFAAPI YDAQGRLVAA IGTKLNLSRL QHWVSHPTSL VADANGLIIL
STDASLVGKA LPDSRVQRMT PSERFTEYQR VDFEPWSYQA AASAQRAVPS WVPADVRDAM
VWRAGSEIPS LTVSRTASAD LTVMVAEPLG SWSYQLATHE RNRSLGFVLF LSGLLVFVLV
VWSLLRERQH HRVTRHLNQS LQRTNSALAN EAHFDHLTGV LTRRRFLALF ETVLTRTHVR
GEQLVLVLAD LDHFKRINDT WGHAVGDLAL QRFASLATSV MRSSDLIGRL GGEEFAVVMG
RTTLEEAAGV VERLRAAVAE ADASLPSGLA MTVSLGMTAC HTGDTASEML RRADLALYRA
KESGRNRHAA G
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