| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2384 |
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| Symbol | |
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| ID | 1221230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2591885 |
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| End bp | 2593654 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238784 |
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| Product | putative lipoprotein |
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| Protein accession | NP_520505 |
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| Protein GI | 17547103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00318443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCGGCC GCCAACGACC GTCACGCTTC CGTCTTCTTG CCACGCCCGC CGCCGCGCTG
CTCGCCGGCT GCGTCCTGTC CGTCGCCTGC ACGGCCGCCC GCGCCGCCTA CGAGGTCAGG
ATCGAGGCGC CCAGGCCGCT GCGGGACCTG CTGGAGCGCC ACCTGGACCT GGCCCGCTAC
CAGGACCGCA AGGACATCAC CGACGATCAG TTGCAGTACA TGGTCGAGAC CATCGGCGAG
CAGGTCACCA AGCTGACCGC CACCGAGGGC TATTTCGTGC CCAAGGCGAC CGCGCAGCTC
GAAGGGCCGC CCGAGCGCCG CACCGTGCGC GTCAAGGTGG AGGCCGGGCC GCGCACCACC
ATCGACAGCG TCGCGCTGGA CTTCACCGGC GCCATCGCGC AGGAGCCCAA GCGCATCGAC
GCGCTGAAGA AGGCCTGGGG CCTGCCGCAG GGGGCGCCAT TCCGCCAGTC CGGCTGGGAC
AAGGCCAAGG AAGACAGCCT GGCCGCCCTG CAGAGCAAGC GCTACTACGC GGCCAGGCAG
ACGGCATCGC AGGCGCGCGT CGACCCCGAC GAGAACAAGG CCGATCTGTC GGTCGCCTAC
GACAGCGGGC CGGCCTACAC GCTGGGGCCG CTGGATGTGC AGGGCCTGTC GCGCTATCCG
CGCAGCATCA TCGACCATGT GAATCCGCTC ATCGTGGGCG AGGACTATTC GGCCGACCGG
CTGCAGGCGC TGGCCGCGGC CATCCAGGGC CAGCCGTATT TCGCCAACGC GATCGTCGAC
CTGGGCGACG ATCCGAACAA TCCGGTCGCG GCGCCGGTGC GCGTGCGGGT GCGCGAATAT
CCGCCCAACC GCATCACCAG CGGGGTCGGC TACAGCACCG ATACCGGCGC GCAGGTGGAA
GGGCGCTACC AGTATCTGAA CCTGTTCGAC AAGGCCTGGG TGCTGGACAC CCAGGCGCGC
ATCGAGCAGC GCCGCCAGTA CCTGTTCGGT AGCGTGACCC TGCCGCCGGA CGGCAAGCGC
TATGTCAACA GCCTCTACGG CAGCCTCGAC CGCACCAACC TGTCGGGCAC CGACACGCGC
AGCTACCGCT CCGGCTTCAA GCAGACGCGC GTGCGCGGCA TCTACGAAAC CTCGTTCACG
ATCGACTTCT ACTACGACGA CCTGCGCCCC GAAGGCGCCG CGCGCGAGCT GAGCAAGGCG
CTGGTGCCGG GCTTCGCCTG GACGCGCCGC GACGTGGACG ACCCGCTGTT CCCGCGCCGC
GGCAACATCC TCACCACGCA GATCGGCGCG GCGGTGAAGG GGCTGCTGAC CGACCAGTCG
TTCGTGCGCT CGTACAGCCG CATCCGCCAG TACGTGCCGG TCGGGCAGCG CGACATCTTC
GTCGCGCGCG CGGAACTGGG CGCGGTGCTC ACCGCGGGCG CCGCCGACGG GGTGCCGGCC
ACGCTGCGCT TTCGCACCGG CGGCACGCAG TCCATCCGCG GCTACGATTT CCAGAGCATC
GGCAACGATG TCAACGGCAG CACGCTGCCG ACCAAGTTCC TCGTCACCGG CGGGGTGGAG
TACCAGCGCT GGTTCCTGCC GCAATGGGGC GCCGCGGTGT TCTGGGACAC CGGCACCGCC
ACCGACAACT GGACGCAGCG CCGGTGGTTC AACGGCGTGG GTGTCGGCGT GCGCTGGAAG
AGTCCGGTCG GCCCGATCCA GCTGGACCTG GCCTACGGCA TCCAGCAGCA CCAGTTCCGT
CCGAGCGTGG CGCTCGGCAT CGCGTTCTGA
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| Protein sequence | MTGRQRPSRF RLLATPAAAL LAGCVLSVAC TAARAAYEVR IEAPRPLRDL LERHLDLARY
QDRKDITDDQ LQYMVETIGE QVTKLTATEG YFVPKATAQL EGPPERRTVR VKVEAGPRTT
IDSVALDFTG AIAQEPKRID ALKKAWGLPQ GAPFRQSGWD KAKEDSLAAL QSKRYYAARQ
TASQARVDPD ENKADLSVAY DSGPAYTLGP LDVQGLSRYP RSIIDHVNPL IVGEDYSADR
LQALAAAIQG QPYFANAIVD LGDDPNNPVA APVRVRVREY PPNRITSGVG YSTDTGAQVE
GRYQYLNLFD KAWVLDTQAR IEQRRQYLFG SVTLPPDGKR YVNSLYGSLD RTNLSGTDTR
SYRSGFKQTR VRGIYETSFT IDFYYDDLRP EGAARELSKA LVPGFAWTRR DVDDPLFPRR
GNILTTQIGA AVKGLLTDQS FVRSYSRIRQ YVPVGQRDIF VARAELGAVL TAGAADGVPA
TLRFRTGGTQ SIRGYDFQSI GNDVNGSTLP TKFLVTGGVE YQRWFLPQWG AAVFWDTGTA
TDNWTQRRWF NGVGVGVRWK SPVGPIQLDL AYGIQQHQFR PSVALGIAF
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