Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2319 |
Symbol | |
ID | 1221164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2518884 |
End bp | 2519843 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637238718 |
Product | hypothetical protein |
Protein accession | NP_520440 |
Protein GI | 17547038 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.201486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG CAAGCTACAA GACGGAAACC TACTGGGAAC AGTACCAATC TTTTTTCCCC GCACACGCGC GAGTTACCGC CGCCAGCGGC CCAAATGAAG AGTGGTTCCC TTGGAAGGGC GCATCGATCC ATCTCGATCG ATTTCCCTGT GCGGCATCGC CGTTGACGGT GATCGTAGTG CATGGAGGTG GAGGATACGG CCGGCTGTTC GTGCCGATTG GCAAGCTACT GCACGCTGCC GGCTATGAGG TGGTCACCCC GGATCTGCCG GGATATGGCT TGAGTCAAGC GCCTCCTTCA CTGGTGACCT ATCAGGCGTG GACCGACTTG CTATGCGATC TGGCGTCCAC CGAGTACCAA AACACGGGGC GCCGCGTCGT CTTGTGCGGT GGAAGCCTTG GTGGCTACCT GGCGTACCTG TGCGCGGCGC GAATGGGCGC TGGCCCGATT GCCGGCGTGA TCGCCACAAC CCTTGCGGAT CCGCGCTCAC CGCTGGTGAG GCGCCAGTTC GCCCGCAACG CACTGGTGTT ACACGCCGCG ATGCCACTGT TGCCCTTCTG TGCACCGCTG TTCGGCAGGC TGAGACTTCC CGTGAAGTGG TTTACCAAAA TGGGCGCGAT GTCGAGCAAT CCAGCGCTAA ACCGGCTCGT TGCCGAGGAT CCCTATGGTG GCGGCGTACG TGTGCCGGTC AATTTCATGC AGTCGATTTT CACCGTTCGG CCGGATGTCG AGCCCGAAGA CTTCGATCAC TGTCCGGTTC TGCTGGCGCA CCCGGGGGAC GACCGCTGGA CGGCCTTCGA ATCGAGTCGA CAGTTCTTCG ATCGCATCAA GGGCGAAAAA AGATTGGTGA TGCTGGAAAA CTGCAGTCAC TTTCCGACTG AAGAGCCGGG CATCACGCAA TTGGAACAAG CTTCGCTCCG GTTTCTAGGG GAGATTGCCA GCAACGGATC GCGCTCATGA
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Protein sequence | MPEASYKTET YWEQYQSFFP AHARVTAASG PNEEWFPWKG ASIHLDRFPC AASPLTVIVV HGGGGYGRLF VPIGKLLHAA GYEVVTPDLP GYGLSQAPPS LVTYQAWTDL LCDLASTEYQ NTGRRVVLCG GSLGGYLAYL CAARMGAGPI AGVIATTLAD PRSPLVRRQF ARNALVLHAA MPLLPFCAPL FGRLRLPVKW FTKMGAMSSN PALNRLVAED PYGGGVRVPV NFMQSIFTVR PDVEPEDFDH CPVLLAHPGD DRWTAFESSR QFFDRIKGEK RLVMLENCSH FPTEEPGITQ LEQASLRFLG EIASNGSRS
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