Gene RSc2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2015 
Symbol 
ID1220855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2194063 
End bp2194797 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID637238409 
Productputative phosphoglycerate mutase protein 
Protein accessionNP_520136 
Protein GI17546734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.458682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0388095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGT TTCCCGCCCC CAAGCGCCGC CGCATCTACC TGATGCGCCA CGGCGCGGTC 
ACGTACTTCG ACGCGACCGG CCGCCCCATC CTGCCCGAGA CCGTGCCGCT CAACGAAGAC
GGCCGCAGGC AGGCCGCCGC GGCCGGGCAG ACCTTCGCGG CCGAGCGCAT CGTCTTCGAC
CGCGTGATCG TCAGCGGCCT GCCGCGCACG GTGGAGACCG CGCAGCGCGT GCTGGCCGAG
ATGCCGGCCA TGCAGGCGCG GAACCTGGCG CTGGAGCCCT GGCCCGAACT GCAGGAAATC
CGCGGCGGCA AGCTGGCCGA GATTCCCGAG CACGACGTCG CCCAGGCCTT CATCGGCGCA
TTCGAGGGCA GGGTGCCGGA GGACCGGCGC TTCCTGAACG GCGAGCGCAT CGGCGACTTC
CTCGACCGCG TGGTCCCGGC CATCGCCCGG CTGCGCGCCC TGCCCGACTG GGACACCGTG
CTGATGGTGC TGCACGGCGG CACCAACCGC GCGATCCTGT CGCATGCCAT CACCGGCGGC
GAGCGGGTGT TCTTCGGCAA CCTCGCGCAG ACCGCCGGCT GCATCAACGT GCTCGATGTG
GGCGAGGCGC CGGGCGACTG GGTGCTGCGC ATGGCCAACT TCTCGCCGCC CTCGCCGGCC
CATCTCGGCT CGCGCCTGAC GACGATGGAA GTGCTGCTGC AGCAGTACCT GCGCTACCGC
CAGCCATCGG CCTGA
 
Protein sequence
MVPFPAPKRR RIYLMRHGAV TYFDATGRPI LPETVPLNED GRRQAAAAGQ TFAAERIVFD 
RVIVSGLPRT VETAQRVLAE MPAMQARNLA LEPWPELQEI RGGKLAEIPE HDVAQAFIGA
FEGRVPEDRR FLNGERIGDF LDRVVPAIAR LRALPDWDTV LMVLHGGTNR AILSHAITGG
ERVFFGNLAQ TAGCINVLDV GEAPGDWVLR MANFSPPSPA HLGSRLTTME VLLQQYLRYR
QPSA