Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2015 |
Symbol | |
ID | 1220855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2194063 |
End bp | 2194797 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238409 |
Product | putative phosphoglycerate mutase protein |
Protein accession | NP_520136 |
Protein GI | 17546734 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.458682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0388095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCCGT TTCCCGCCCC CAAGCGCCGC CGCATCTACC TGATGCGCCA CGGCGCGGTC ACGTACTTCG ACGCGACCGG CCGCCCCATC CTGCCCGAGA CCGTGCCGCT CAACGAAGAC GGCCGCAGGC AGGCCGCCGC GGCCGGGCAG ACCTTCGCGG CCGAGCGCAT CGTCTTCGAC CGCGTGATCG TCAGCGGCCT GCCGCGCACG GTGGAGACCG CGCAGCGCGT GCTGGCCGAG ATGCCGGCCA TGCAGGCGCG GAACCTGGCG CTGGAGCCCT GGCCCGAACT GCAGGAAATC CGCGGCGGCA AGCTGGCCGA GATTCCCGAG CACGACGTCG CCCAGGCCTT CATCGGCGCA TTCGAGGGCA GGGTGCCGGA GGACCGGCGC TTCCTGAACG GCGAGCGCAT CGGCGACTTC CTCGACCGCG TGGTCCCGGC CATCGCCCGG CTGCGCGCCC TGCCCGACTG GGACACCGTG CTGATGGTGC TGCACGGCGG CACCAACCGC GCGATCCTGT CGCATGCCAT CACCGGCGGC GAGCGGGTGT TCTTCGGCAA CCTCGCGCAG ACCGCCGGCT GCATCAACGT GCTCGATGTG GGCGAGGCGC CGGGCGACTG GGTGCTGCGC ATGGCCAACT TCTCGCCGCC CTCGCCGGCC CATCTCGGCT CGCGCCTGAC GACGATGGAA GTGCTGCTGC AGCAGTACCT GCGCTACCGC CAGCCATCGG CCTGA
|
Protein sequence | MVPFPAPKRR RIYLMRHGAV TYFDATGRPI LPETVPLNED GRRQAAAAGQ TFAAERIVFD RVIVSGLPRT VETAQRVLAE MPAMQARNLA LEPWPELQEI RGGKLAEIPE HDVAQAFIGA FEGRVPEDRR FLNGERIGDF LDRVVPAIAR LRALPDWDTV LMVLHGGTNR AILSHAITGG ERVFFGNLAQ TAGCINVLDV GEAPGDWVLR MANFSPPSPA HLGSRLTTME VLLQQYLRYR QPSA
|
| |