Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1383 |
Symbol | |
ID | 1220207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1474954 |
End bp | 1475979 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637237761 |
Product | D-aminopeptidase protein |
Protein accession | NP_519504 |
Protein GI | 17546102 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3191] L-aminopeptidase/D-esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.306178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACA GCATGGCCCA CATCGGCGTG CTGCCGGCTG GCGCGCGCAA CAGCATCACG GACGTGGCCG GCATCACGGT CGGGCACGCC ACGCTCGCCG GCGGCAGCAT CCAGACTGGC GTGACGGTGG TGCGCCCGCA TGCCGGCGAT CCGTTCCTCG ACAAGGTGCC CGCCGCGTGC GCGGTGCTCA ACGGCTTCGG CAAGAGCGTC GGCCTGCTGC AGGTGGAGGA GCTCGGCGTG CTGGAGACGC CCATCGCGCT GACCAACACC TTCGCCGTGG GCGACGTGGC GCGGGCACAG GTCCAGCAGG CGGTCGAGGC GCATCCGCAG ATCGGGCGCG CCTGGCCCAC CGTCAACCCG CTCGTCTTCG AATGCAACGA CGGCTACCTG AACGACCTGC AGTCCTTCGC CGTGCGCGAC CTGCACTACT ACGCCGCGTG CCTGGCGGCG GGCGGCGCGT TCGCGCAGGG CGCGGTGGGC GCGGGCCGGG GCATGTCGGC GTTCGGCGTG AAGGGGGGGC TCGGCTCGGC CTCGCGCGTG GTCGCGCTGG AGGACGGCAC GCGGCGCACG GTCGGCGCGC TGGTGCTGGC CAACTTCGGC GTCACGGCGA ACCTGACGCT GGCCGGCCGC CGCATCGGCG CCGACATCGC CCGCGTGCTG GCCGAGGACG CGCCGGGGCC GGAGAAGGGC TCCATCATCA TGCTGCTCGC CACCGATGCG CCGCTCGACG CGCGCCAGCT GCGGCGCGTG GCGCTGCGCG CGGGCGCCGG CCTGGCGCGC ACCGGCTCGG TGTTCGGCCA CGGCAGCGGC GACATCGCGC TGGCGTTCTC CACGGCCTAC ACCGTGCCCC ATCTCGGCGC GCGCCCGATG CCGGCCGTCG CCATGACGCA CGAGACCCAT CTCGACCCGC TGTTCCAGGC CGCCGCCGAC AGCGTCGAGC AGGCCATCGT GCATGCCCTT TTCTACGCCG AGACCGTCAC CGGCCGTGAC GGCCACACGC GGCGTGCCCT GACCGAACTG TTGTAG
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Protein sequence | MTHSMAHIGV LPAGARNSIT DVAGITVGHA TLAGGSIQTG VTVVRPHAGD PFLDKVPAAC AVLNGFGKSV GLLQVEELGV LETPIALTNT FAVGDVARAQ VQQAVEAHPQ IGRAWPTVNP LVFECNDGYL NDLQSFAVRD LHYYAACLAA GGAFAQGAVG AGRGMSAFGV KGGLGSASRV VALEDGTRRT VGALVLANFG VTANLTLAGR RIGADIARVL AEDAPGPEKG SIIMLLATDA PLDARQLRRV ALRAGAGLAR TGSVFGHGSG DIALAFSTAY TVPHLGARPM PAVAMTHETH LDPLFQAAAD SVEQAIVHAL FYAETVTGRD GHTRRALTEL L
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