| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1096 |
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| Symbol | aspC |
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| ID | 1219908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1154015 |
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| End bp | 1155226 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237462 |
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| Product | aspartate aminotransferase protein |
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| Protein accession | NP_519217 |
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| Protein GI | 17545815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.420388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCCA TGTTGTCTTC GAAGGTATCG ACCCTGGCCC CATCCCCGAT CCAGCTGATG
GCCGCGAGAA CGCGCGAGGC GCGTGAGGCC GGCCGGGACG TGGTCGATCT CACGCTCGGC
GAGCCCGACT TCGCCACGCC CGAGCACATC TGCGAAGCCG CGCGGCGGGC GATCGCCGAC
GGCCTGACGA AATACACGCC GATCAGCGGA CTGGCGCGCC TGCGGGAAGC GGTCGCCCGC
AAGTTTCGCG ACGAAAACGG CATCGAATGC ACGGCGGCCG AGACCCTCGT CGGCTGCGGC
GGCAAGCAGG TGATTTACCA GGCGTTCGTC GCCACCATCG ATCCTGGCGA TGAAGTCCTG
ATCCCGGCAC CGTACTGGTC GTCCTACGCC GACATCGTGA CCCTGTGCGG CGGCATCGTG
AAGCCGCTTC CGACCACGCC CGAGAGCGGC TACGCACTGC AGCCGCAGAC GCTGGCCGCG
GGCATTTCGG CGCGGACCAA ATGGCTCGTG CTGAATGCGC CGAGCAATCC CAGCGGAACC
GCCTACACCG CGGCGCAGCT GGAGGCCTTT GCCGAAGTCC TGCGCCGCAG CGGCAACCCG
CGCCTGCTCA TTCTCGCCGA CGACATCTAC GAGCACATCG TCTTCGATGG CCTGCGGTTC
GCATCCTTTA CCGCCGTCGC GCCGGATCTG CGGCACCGCA CGCTGACGGT CAACGGCGTG
TCCAAGGCGT ACGCTATGAC GGGCTGGCGC GTCGGCTACG GCTGCGGGCC GAAGCCGCTG
ATCGATGCGA TGGCGAACGT GCAGATGCAG GTCAATTCCC ATACCGCCTC CATCTCGCAG
GCCGCCGCGA TCGCCGCGCT CGAGGGGCCG CAGGACGAGC TGGCGCGCCG GCGCGCCATC
TTCGAGCAGC GCCGCGACAG CCTACTGAGC CGCCTGGGCG GCATCGCGGG CCTGCGCACC
CCGCGTCCGC AGGGCGCGTT CTATCTGTTC CCGGACGCGC AGGCCTTCAT CGGCCGACGC
ACGCCCGAAG GGTGCGCCAT CGACGACGAC CAGGCGCTCG CCGCCTATCT GCTGGACAGC
GGCGTCGCGG TGGTCCCGGG TTCGGGTTTC GGCATGCCGG GTTGCCTGCG CCTGTCGTAC
GCGACATCGG AGGCGCGGCT CGAGCTGGCG GCAACGCGAC TTGCCGGCGC GCTGCGCAGG
CTCGGCGACT GA
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| Protein sequence | MHAMLSSKVS TLAPSPIQLM AARTREAREA GRDVVDLTLG EPDFATPEHI CEAARRAIAD
GLTKYTPISG LARLREAVAR KFRDENGIEC TAAETLVGCG GKQVIYQAFV ATIDPGDEVL
IPAPYWSSYA DIVTLCGGIV KPLPTTPESG YALQPQTLAA GISARTKWLV LNAPSNPSGT
AYTAAQLEAF AEVLRRSGNP RLLILADDIY EHIVFDGLRF ASFTAVAPDL RHRTLTVNGV
SKAYAMTGWR VGYGCGPKPL IDAMANVQMQ VNSHTASISQ AAAIAALEGP QDELARRRAI
FEQRRDSLLS RLGGIAGLRT PRPQGAFYLF PDAQAFIGRR TPEGCAIDDD QALAAYLLDS
GVAVVPGSGF GMPGCLRLSY ATSEARLELA ATRLAGALRR LGD
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