| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0717 |
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| Symbol | |
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| ID | 1219523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 764210 |
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| End bp | 764641 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237077 |
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| Product | putative type-4 frimbrial pilin-related signal peptide protein |
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| Protein accession | NP_518838 |
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| Protein GI | 17545436 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.57248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCGTC CGACCGGCTT CACCTTCATC GAACTGCTGA TCACCCTGGC CATTGCCGGT
GTGCTTGCGC TGGCGGCATC ACAGGCATGG TCCGGCGCTT ACCTGCGGAC GGAACGCATG
GCAGCGCATG CGGCGCTGGT CGCGACCATG GCCGCACTGG AACAGCACCA CGCGCAAACC
GGCAGCTACG CCTTGCCCGG CGACGACACT TCGCCCTTGG ACCGCTGGCC GCACACGCTG
GAACACCCGC GTGGCTACCG GTTGTCCGCC CGCCGGTGCG CGGGCCACGC GCTGATCCAC
TGCGTGGAGA TGGCGGCCAG TCCCGTCCGG CCCGACGCGG ATTGCGGCAC GCTGATCCTG
CGCAGCACCG GGGAACGCTT CGCCGAGATC GCAGGCGCAC GGCGATGGGC CCCTGCATCC
TGCTGGCCAT GA
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| Protein sequence | MLRPTGFTFI ELLITLAIAG VLALAASQAW SGAYLRTERM AAHAALVATM AALEQHHAQT
GSYALPGDDT SPLDRWPHTL EHPRGYRLSA RRCAGHALIH CVEMAASPVR PDADCGTLIL
RSTGERFAEI AGARRWAPAS CWP
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