| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0625 |
|---|
| Symbol | |
|---|
| ID | 1219430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 672486 |
|---|
| End bp | 673451 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637236984 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_518746 |
|---|
| Protein GI | 17545344 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCT CGGGCAGCAC ACAGCAACAC GGCAGCACGC ACGTCGCGGC ATTGCATGAA
GCACTGGCAC AGTCCATCGG GCGATGGACC GAGGGGCTGG AAGACTGTTC AACATCGATC
CCCAACCTGG GGCTTTTCCG GCGGGACACT GCCGTGGAGC CGTGCGTATG CCTGGTGGAG
CCCAGTGTTG TTCTGGTTGC TCAGGGCGCC AAGCAACTAC AGGTGGGTGA TGAGGCATAC
ACCTATGACA TTGAGCGTTT TCTGGTCACA TCGCTGGATA TGCCCGCCGT TTCGCGCGTA
TTGGATGCCA GCCCGGAGAG GCCATGCCTG GGGCTGGTGT TCAAGCTCGA CTTGCGGATC
ACCGCGGAGC TGATCGCACA GAGCGGCCTG CCGCCACCGA CCGAGCCCGC TGCAGAACGA
GGCATGGCGC TGGGTACCCT CACGCCGCTC CTGCTGGAGC CGCTGAAGCG ATTGGTTGAT
TTGCTGGACG AGCCGGAGGC CGTTCCGGTA CTTGCGCCGC TCATCCAGCG TGAAATTCAT
TTCCGCCTGC TGATGAGTGA CCAGGCGACA CGCCTGTGGC AGATCGCGTC GGCAGGCAGC
CAGGGACACC GGATTGCCAC GGCAATAGAC TGGCTGAAGG TGAATTTCGC CCTGCCGCTT
CGAATCGACG AACTTGCAGC GCGGGTACAA ATGAGTACCT CTAGCCTCCA TCACCATTTC
CGTCAGCTCA CCACCATGAG CCCGCTGCAG TATCAGAAAT GGCTGCGGCT AAACGAGGCA
CGGCGCCTGA TGCTCAATGA GCATCTGGAT GCGGCAACGG CCGCCTTCCG CGTCGGCTAC
GAAAGTCCTT CGCAGTTCAG TCGCGAATAC AGTCGCCTGT TTGGTCAGCC GCCCAAGCGT
GATATTGAGG GACTGCTTCG CAAGGCCGAG GACGCGAGCT ATTCGCAAGC GGTGGCCAAC
GCCTAA
|
|---|
| Protein sequence | MDSSGSTQQH GSTHVAALHE ALAQSIGRWT EGLEDCSTSI PNLGLFRRDT AVEPCVCLVE
PSVVLVAQGA KQLQVGDEAY TYDIERFLVT SLDMPAVSRV LDASPERPCL GLVFKLDLRI
TAELIAQSGL PPPTEPAAER GMALGTLTPL LLEPLKRLVD LLDEPEAVPV LAPLIQREIH
FRLLMSDQAT RLWQIASAGS QGHRIATAID WLKVNFALPL RIDELAARVQ MSTSSLHHHF
RQLTTMSPLQ YQKWLRLNEA RRLMLNEHLD AATAAFRVGY ESPSQFSREY SRLFGQPPKR
DIEGLLRKAE DASYSQAVAN A
|
|---|
| |