Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0160 |
Symbol | |
ID | 1218963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 180020 |
End bp | 180946 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236517 |
Product | transcription regulator protein |
Protein accession | NP_518281 |
Protein GI | 17544879 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.603691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.705877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCATT CGCCGCTGCG CTATCTGCAT AGTTTCCTGA TCGTCGCCAA CGAGGGCAGC TTCGTGCGCG CGGCGGATCG GCTCGCCGTG TCGCAGCCGG CGCTGTCGTA CCAGATGCGC CAGCTGGAGC AATGGCTGGG CGTGCCGCTG TTCGAGCGCG CCGGGCGCAA GCTGGTGCTC ACGCGCGCCG GCGCTTCGGT GCGGGCGTGG TGCCGCGACG CGTTCGCCGG GCTGGACGAG CTGCGCGCCG CATTGCACAG CGGCGAGATG GAGCGCGTAT CGCTCAAGCT GGCGAGCGGT TCCAGCTTCG GCCGCCACGT GCTGATGCCG GCGTTGCTGG ACCCGGCCCC CGAGTCCGAC GCGCCGCTGC TGGACGACGT GCGGCTGGAG CTGGCCTTCG GCAGCGACGA CGAGGTCTTC GCCCATGTCG AATCGGGCCG CGCCGACCTG GGCTTCGTCT ACACGCCGCG CACCTCGCGG CTGTTCGAGC ACCACGCTGT CTATACCGAA GAATTCGTGC TGGCCTGCGG CGCCCGCGCG CTGCGCGAAC GCGAGGCGCC GCGCACGCTG GCCGACTGCG CGGCGCTGCC CTTCGTCACC TACGACGAAT CCGATGCGGT GTACGGCCTG TGGTTTCGGG CGCTGTTCCG GCGCATGCCG GAGACCACCG TCAGCGCGCA CCACGTCTCG GAACTGGAGG AGGTCGCCAC ACTGGTGGCG GCCGGCATGG GCTGGTCGGT GCTGCCGCTG CATGCGATTC GCGACCCGGT GGCGAGCGCC CGGCTGCAGG TGGTGCGGCC GGTATCGACG CGGCGCTGCC TCAACACCGT GTTCGCCGTG CGGCGCACCT CGAGCTTTCC CAGCGAGGCG CAGGATCGCT TGCTGGTGCG ATTGGCGCAG CTGGAGGCAG CCGCGGCGAC AGCCTAG
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Protein sequence | MSHSPLRYLH SFLIVANEGS FVRAADRLAV SQPALSYQMR QLEQWLGVPL FERAGRKLVL TRAGASVRAW CRDAFAGLDE LRAALHSGEM ERVSLKLASG SSFGRHVLMP ALLDPAPESD APLLDDVRLE LAFGSDDEVF AHVESGRADL GFVYTPRTSR LFEHHAVYTE EFVLACGARA LREREAPRTL ADCAALPFVT YDESDAVYGL WFRALFRRMP ETTVSAHHVS ELEEVATLVA AGMGWSVLPL HAIRDPVASA RLQVVRPVST RRCLNTVFAV RRTSSFPSEA QDRLLVRLAQ LEAAAATA
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