Gene RSc0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0003 
Symbol 
ID1218805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1110 
End bp1424 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content68% 
IMG OID637236359 
Producthypothetical protein 
Protein accessionNP_518124 
Protein GI17544722 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.296608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.77875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG TGCTGCTGTT CCTGCTGCGT GTCTACAAGG TGGCGTTCAG CCCCTTCGTC 
GGCGCGCAAT GCCGTTTCCT GCCGACCTGC TCCGACTACG CGCGCGACGC TGTGCTCACC
CACGGGCCGG CGATCGGCAG CTACCTTGCG GCAAAACGCC TGTGCCGCTG TCATCCGTTC
GCGCAAGGCG GGTATGATCC TGTGCCGCCC GCCGCTGGCG ACGCTGCGCT GCGCTCCACC
GATTCCGCAT CGACCGAGAC GACCGCAGCC GACGCACCGG CCGCGCGGCC GTCGATTCAC
CTTCCCAGAC CGTAA
 
Protein sequence
MTRVLLFLLR VYKVAFSPFV GAQCRFLPTC SDYARDAVLT HGPAIGSYLA AKRLCRCHPF 
AQGGYDPVPP AAGDAALRST DSASTETTAA DAPAARPSIH LPRP