Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0003 |
Symbol | |
ID | 1218805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1110 |
End bp | 1424 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236359 |
Product | hypothetical protein |
Protein accession | NP_518124 |
Protein GI | 17544722 |
COG category | [S] Function unknown |
COG ID | [COG0759] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.296608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.77875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCG TGCTGCTGTT CCTGCTGCGT GTCTACAAGG TGGCGTTCAG CCCCTTCGTC GGCGCGCAAT GCCGTTTCCT GCCGACCTGC TCCGACTACG CGCGCGACGC TGTGCTCACC CACGGGCCGG CGATCGGCAG CTACCTTGCG GCAAAACGCC TGTGCCGCTG TCATCCGTTC GCGCAAGGCG GGTATGATCC TGTGCCGCCC GCCGCTGGCG ACGCTGCGCT GCGCTCCACC GATTCCGCAT CGACCGAGAC GACCGCAGCC GACGCACCGG CCGCGCGGCC GTCGATTCAC CTTCCCAGAC CGTAA
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Protein sequence | MTRVLLFLLR VYKVAFSPFV GAQCRFLPTC SDYARDAVLT HGPAIGSYLA AKRLCRCHPF AQGGYDPVPP AAGDAALRST DSASTETTAA DAPAARPSIH LPRP
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