Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4122 |
Symbol | |
ID | 3711838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007489 |
Strand | + |
Start bp | 88117 |
End bp | 90816 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640069471 |
Product | hypothetical protein |
Protein accession | YP_345338 |
Protein GI | 77404765 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.412369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTCA CAATGTTCTC GGTGACGAAG GTCAAGGCAG TCAGGCCGGT GGAGCTGTCG AAGCGGTATG ATCTGCGCGA CGGCAACCTG ACGAAGACGG TGGTGGCGGC GCTCTCTCGC GGTCAGGTAG AGACGCTGGA GCTCGAAGGG ATCGAGGCCC TGGCAGAGGT GATCTCCCGG CTCACGCCGG CGGAGGCGCT CATGCTCGGC GTGCCCCAGA TCAAGTCCGC CACGACGATT GTAACCCGGC GGATGCTAAG CGCGCATCTC CGTGAAGGAG ATATTGCCCG GACGGCTGAT AATTTCGTCT ATCCCGAAGG GGCGGGTTTC CTGTTCATCG ACCACGACGG TCTGCAGGAC GGAACCTGCC TCTCCCGGGA GGATCTGCTC GAGCGGCTTT ACGCCTGCGC GCCAAGCCTG CGGCAGGTCA AGATCCTCGC GTTGCCCTCG TCCTCCTCGC ACATCTGCCG GACGGACACT GGCGAGGATC TGACCGGCGC GCGGGGGTTG CATCTCTATA TCCCCGTGAA GGACGCGCGG GACATCCCGC GCATCGGCAA GGTCCTGACC GATCTCCTCT GGCTGGGCGA CCAGGGATAT GTGCGGATCG CCTCGAATGG CGCCCGTCTG CTGCGCAGCC CGATCGACAG CACGGTCTGG CAGCCGAGCC GGCTGGTGTT TGCGGCTGGG GCGATCTGCG CCAACGGGCT TGAGCAGCGG CGGGGCGCGC CGGTGATCGT CAATCCGGAA GGCGCGGACC TCTGGGACAG CGTGGCGCTG CTGCCTACTC TCGATGCGGC CGCCCAGGCT CTGGTGCAGG CGACGCGCGA CCGCGCCCTG GCGCTGTCCC AGAAGGCGGC GGATGAACAG CGAGCGGTCT GGCTCGAGGA CTTTCGTCCG GGGCTGTTGC GCGATCTCGG GGCCGGGCCG GAGGCACGGG AGCCGCGGGA GGAACTCCTT GCCGCGGTGG AAAATGCCGT TCTCGGCCCG GGCCTCCTGC TCTTCGTCCG GCGTGCCGGC GAGGTGCAGT TCGCGCCGGT GACCGTGGAG GCCATCCTCG CCGACCGGAT CGGCTATCAC CGGGCAATCA CGCTCGACCC GATCGAGCCC GACTACAACG GTCGGGCTCC CGTCGGCTGT CTGTTCCTCG ACGGGAGAAC TCCGGTCCTG CATTCGATGG CGCATGGCGG AACGAGCTAT CGGCTCGAGC GGCGGACAAC GATCGTCGAG CTTCATCCTG GCCGGATGGC GGAGGCGACG GAGGCGGTGC TCACCCACAT GCGCGGCGAC AGCCGCTTCA TGGATCACGG CGACCTCCTC GTCACGATCC ATGACGGCAA GCGCCAGCCG ATCGACGAAT ACCGGCTCGA ACTCATGCTG GGAGACATCC TGTTCCTGAA GGCCGACGCA AAGGGGAGGA TGAAGCCCTC CGATCCGCCG TCGAGGCTTC TGCGCCAGAT CCTGAGCCTC GGCGCGCAGC GCCGCCTGCG CCGCCTGACC TTCATTCTGC GCCGCCCGAC CCTCAACGCC CGGGGGGAAC TGCTCACGCG GCCCGGCCAT CATGCGGGCG AGGGCCTCTA TCTGGACTAC GATCCCGAGG AGTGGCCCGA GATCCCCCTG ACCCTTTCGC AGGAGGATGC ACGAGCCGCC CTGAAAATGA TCTGGAAGCC CTTCGCGGCC TTTCCTTTCG TGGATGCGGC TTCGCGCGGA GCCCTTCTGG CGGCGATTTT TACCGCGATC CTTCGTCCGT CCCTGCCGAC GGCACCCCTG GTTGCCAGTG ACGCTCCCAA CCACGCCTGC GGCAAGACCT TGGCGCTGGA GGCGGTGGCC AGCCTCGCTG CGGGCGAGCC GGTGAGCGTG GCGGCGCCCT TCGACGGGGA CCAGGCGGAG ATGCGCAAGC TGCTGACCAG CACCGCCCTT GCCGGCGACT CCACGCTCCT CTTCGACAAT TGCCGGACCT TGCTCGACTC CCCCCAGCTG AGCGCCTTCC TGACGGGCGA ATACTGGTCG GACCGGCTCC TCGGATCCAA CGTGATGCGC AATGGCCTGC CCACCCAGAT CTTCCTGGGC GTCACGGGGG TCAACCTGCA GTTCAGCGCC GAACTGCGGC GCCGGACGAT CGCCTGGCGG ATCGATCCGC AGGTCGAGCG CCCCCATGAG CGGGCCTTCG ACTTCTGCCC GCGGGAGCAG GTCATGACGT TCTACAAGGA AATCGTGGCA GCCAGCCTTG CGCTCATCAG GACGGCGCAG GCTGCGGATC TGCCGAGGCC GGCTCATACC TTCGCCTCCT ATCCGGTCTG GGACCGCCTG ATCCGCACGG CGGTGCGACA TGCCGCGCAG CTGACCGACG GCTTCTTCGC CGATCCGGTG CCCCAGGCTG TCCGCGCCGT GGCCGAGACG GAGGAGGTGA TCGACCTGCA CGCCCTGCTC GCCGGGCTGA TGGAGGCCTT CGGCGGCGAG GCCTTCGGCT CGGTCGATGT CTGCATGCTG ATCGAGGATC CGGCCAACCG CAGGCTCGGA GCCCTGATGG CAGGCGCCAC CCAGCGTCCG GACCGGCTTT CCCCGAAAAG TCTCGGCCGC TATCTGGCGC AGTATGTCGA CCGGCCGAGC GGCCATCTGG TGCTGCGGGC GCGGCGCGGA AGCAAGGCGC TGAGCTTCTT CGTGGAGCGC GTCCCTCAGG AGGCCCCGGA ATCCGCCTGA
|
Protein sequence | MELTMFSVTK VKAVRPVELS KRYDLRDGNL TKTVVAALSR GQVETLELEG IEALAEVISR LTPAEALMLG VPQIKSATTI VTRRMLSAHL REGDIARTAD NFVYPEGAGF LFIDHDGLQD GTCLSREDLL ERLYACAPSL RQVKILALPS SSSHICRTDT GEDLTGARGL HLYIPVKDAR DIPRIGKVLT DLLWLGDQGY VRIASNGARL LRSPIDSTVW QPSRLVFAAG AICANGLEQR RGAPVIVNPE GADLWDSVAL LPTLDAAAQA LVQATRDRAL ALSQKAADEQ RAVWLEDFRP GLLRDLGAGP EAREPREELL AAVENAVLGP GLLLFVRRAG EVQFAPVTVE AILADRIGYH RAITLDPIEP DYNGRAPVGC LFLDGRTPVL HSMAHGGTSY RLERRTTIVE LHPGRMAEAT EAVLTHMRGD SRFMDHGDLL VTIHDGKRQP IDEYRLELML GDILFLKADA KGRMKPSDPP SRLLRQILSL GAQRRLRRLT FILRRPTLNA RGELLTRPGH HAGEGLYLDY DPEEWPEIPL TLSQEDARAA LKMIWKPFAA FPFVDAASRG ALLAAIFTAI LRPSLPTAPL VASDAPNHAC GKTLALEAVA SLAAGEPVSV AAPFDGDQAE MRKLLTSTAL AGDSTLLFDN CRTLLDSPQL SAFLTGEYWS DRLLGSNVMR NGLPTQIFLG VTGVNLQFSA ELRRRTIAWR IDPQVERPHE RAFDFCPREQ VMTFYKEIVA ASLALIRTAQ AADLPRPAHT FASYPVWDRL IRTAVRHAAQ LTDGFFADPV PQAVRAVAET EEVIDLHALL AGLMEAFGGE AFGSVDVCML IEDPANRRLG ALMAGATQRP DRLSPKSLGR YLAQYVDRPS GHLVLRARRG SKALSFFVER VPQEAPESA
|
| |