Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3950 |
Symbol | aapP |
ID | 3712053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 101527 |
End bp | 102279 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069388 |
Product | AABC amino acid transporter, ATPase subunit |
Protein accession | YP_345255 |
Protein GI | 77404681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGGGA CAGGCGCAGC GGAGCAGGGC ATTGCCTTCG ACCGTGTCAA CAAGTGGTAC GGCCAGATGC ATGTGCTGCA GGATGTGACC TTCTCCGTCG CGCCCGGCGA GAAGATCGTG GTCTGCGGGC CTTCGGGTTC GGGCAAATCC ACCATGATCC GCTGCATCAA CCGGCTCGAG GAACATCAGG CGGGCACCAT CCGCGTGGGC GGGGTCGAGG TGAACGACCA GCGCCGCAAC ATCGAGCAGG TTCGCCGCCG CGTGGGCATG GTGTTCCAGA ACTTCAACCT CTACCCGCAT CTGACGATCC TCGAGAACTG CACCCTCGCG CAGCGCTGGG TGCGGGGCAC GCCGCGGGCC GAGGCCGAGG CGCGGGCCAT GCGCTATCTC GAGCGGGTGC GCATCCCCGA TCAGGCGCGG AAATATCCGG GCCAGCTCTC GGGCGGCCAG CAGCAGCGGG TGGCCATCGC GCGCTCGCTC TGCATGGAGC CCGAGATCAT GCTGTTCGAC GAGCCGACCT CGGCGCTCGA TCCCGAACTG GTGCGCGAGG TGCTCGACAC GATGGTCTCG CTCGCCGAGG AGGGCATGAC CATGATCTGC GTGACCCACG AGATGGGCTT CGCCCGTCAG GTGGCCGACC GCGTGATCTT CATGGACCGC GGCCGCATCG TCGAGAGCGC GGCGCCCGAA GACTTCTTCT CGAACCCTCA GGAGGAACGC TCGCGGCTGT TCCTCAGTCA GATCCTGCAC TGA
|
Protein sequence | MDGTGAAEQG IAFDRVNKWY GQMHVLQDVT FSVAPGEKIV VCGPSGSGKS TMIRCINRLE EHQAGTIRVG GVEVNDQRRN IEQVRRRVGM VFQNFNLYPH LTILENCTLA QRWVRGTPRA EAEARAMRYL ERVRIPDQAR KYPGQLSGGQ QQRVAIARSL CMEPEIMLFD EPTSALDPEL VREVLDTMVS LAEEGMTMIC VTHEMGFARQ VADRVIFMDR GRIVESAAPE DFFSNPQEER SRLFLSQILH
|
| |