Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3056 |
Symbol | |
ID | 3721643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 94964 |
End bp | 96898 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640072733 |
Product | TonB dependent-iron siderophore receptor |
Protein accession | YP_354574 |
Protein GI | 77465071 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCC TGTCGCCCCG AACGATCCGG CTTCTGGCCG GGAGCGCCGC CCTGAGCGGG TCCTGCGTCG CCGCCCATGC GCAGGATCTG GCCTTCTCGC TCGATCCCAT CGTGGTGCAG GCGCGCGACG ATTTCGCCGA AGCCGCCGAC CGCGCCACCT CGATGTATGT CGCCGATGCC GAGCTGGAGC GCGCGCGCAC CGGAGACCTC AAGGACGTCT TCGCGGGCAT CGCCTCTGTC TCGGTCGGAG GGGCGCTGCC TCTCACGCAG AAGATCTTCG TGAACGGCGT CGACATGCTG AATCTCGGCG TCAGCATCGA CGGGGCCGCG CAGAACAACC GCGCCTTCCA CCATGTCTCG GCCAATGCGA TCGATCCGGG GCTGCTCAAG CAGGTGCGCG TGGATGCCAC GATCTCGCCG GCCGATGCCG GGCCCCATGC GCTCGCGGGC TCGGTCGTGT TCGAGACGGT CGATGCCGCC GACATCCTCG GCGAGGTGCA GCGCTTCGGC GGCACCCTGC GGCTGAGCTA CGGCGACAAC GGCAAGACGG CGCAGGGCGC CCTGACCCTC GCCGGGCGCG AGGGCGGCTT CGAGTGGCTG GCTTACGCCA AGCGCGCCAC GGGCGACGAT TACGAGGATG GAGACGGGGC CACGCGGCTC GGGACGGCGG CCAATCTCAA GAGCGCGCTG GGAAAGCTCG CCTATGAGAG CGACGGCGGC CACCGGTTCG AGCTGTCGGC GCTGCGCCTG AGGGACGACG AGCTGCGCCA GTTCCGCGCG AATTTCGGCG GTCTGGGCGG GGTGGTCGAT CAGCTGCGCG TCTACGACAC GACGCGGGAA AGCTGGTCGC TCTCCTACGA GAACACGCAA GGCGAGGGGA TGTGGGATCC GAGCCTCCGG CTCGGCTATT CGGAGAGCGA CGTCGTCATT CCCCTGCCCT ACGACAGCAA CGGCCTGTCG GGCACATGGT CGGCCACGCT GCAGAACGAT TTTCACCTGA ACGCCACCGA CCGGATCTCG GCCGGCCTCG ACTGGCAGCG CCGGTTCGGG GAATATTCGA GCCCGACCTT CGGCGAGTTC CTCGATGAGA CATCGCACAA CCTCGGCCTC TTCGTGCAGG CCCGGCTCGA GCCCACCGAT CGCTGGCGCC TTTCGTTCGG CGGCCGCCTC GACCGGCAGG AGTTCGAGGG CGTCGATGGC AGCGACCTCG GCCACTCGGG GCCCTCGGGC AACCTCTCCG CAAGCTACGC CCTGACCGAG CGCCTCACGT TGCGCGGCGG CCTGTCCTCG ATCTTCGGCG GCATCGACAT CGAGGACAAT TACATCTTCC GGCCGAGCTG GAGCTACGAC AGCCTCCGGC CGTCGCGGGC GCGGAACGCG AGCCTCGGCT TCGACTGGGA CGTGGGCGCC TTCAAGGTCG GAGGCGAGCT CTTCCTGACC GAGATCAACC GCGCGCGCAG TGCCACCGAA ATGTTCGACT TCGAGAGCCG CGGCTTCAAC CTCGGCGCGA CCTACGGCTG GGACGGTGGC TTTGCGCGCG TCACCCTCTC CCACAGCGAG GTGAAGGTGG ACGGCGCAAA GGCCGCGGGC TACGAGGCGC TCGACTTCGG CGCCCCTCTG GGCACGGTGG CCGCGGTCGA GCTTCAGCAG GACACGGCAG TTGCGGGGCT GCGGCTCGGC GGCGGGCTCG ATCTCGCGCT CGACCACGAC ATGCCCGCTA CGGCCGAACG GGATCTCGCG GGCTATTCGG TGGTGAACCT CTTTGCCGAA TATGTGCCGC CTGAGGCGCA GAACCTCACG CTCCGGCTGC AGGTCGACAA CCTATTCGAC AAGACCTATG CGGACCGCGC GACCTACGGC GCGGAATACA GCGACGTCAC CTCGCTGAAG GAGCCGGGCC GGACGATCAC GCTCAGCGCG GTCACGCGCT TCTGA
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Protein sequence | MSILSPRTIR LLAGSAALSG SCVAAHAQDL AFSLDPIVVQ ARDDFAEAAD RATSMYVADA ELERARTGDL KDVFAGIASV SVGGALPLTQ KIFVNGVDML NLGVSIDGAA QNNRAFHHVS ANAIDPGLLK QVRVDATISP ADAGPHALAG SVVFETVDAA DILGEVQRFG GTLRLSYGDN GKTAQGALTL AGREGGFEWL AYAKRATGDD YEDGDGATRL GTAANLKSAL GKLAYESDGG HRFELSALRL RDDELRQFRA NFGGLGGVVD QLRVYDTTRE SWSLSYENTQ GEGMWDPSLR LGYSESDVVI PLPYDSNGLS GTWSATLQND FHLNATDRIS AGLDWQRRFG EYSSPTFGEF LDETSHNLGL FVQARLEPTD RWRLSFGGRL DRQEFEGVDG SDLGHSGPSG NLSASYALTE RLTLRGGLSS IFGGIDIEDN YIFRPSWSYD SLRPSRARNA SLGFDWDVGA FKVGGELFLT EINRARSATE MFDFESRGFN LGATYGWDGG FARVTLSHSE VKVDGAKAAG YEALDFGAPL GTVAAVELQQ DTAVAGLRLG GGLDLALDHD MPATAERDLA GYSVVNLFAE YVPPEAQNLT LRLQVDNLFD KTYADRATYG AEYSDVTSLK EPGRTITLSA VTRF
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