Gene RSP_3006 details

Gene Information

• Locus tag: RSP_3006
• ID: 3721593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007494
• Strand: +
• Start bp: 41397
• End bp: 42065
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640072686
• Product: hypothetical protein
• Protein accession: YP_354527
• Protein GI: 77465024
• COG category: [R] General function prediction only
• COG ID: [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGATG ACCTAATCCT GCGTCAGGAA GCACTAGTTG AAAATCCAAC AGCGCGTCTT 
CCAGTGTGTC TTGTACTCGA TACGAGCGCT TCGATGACCG GCGCGCCGAT CACGGAACTT 
CAGGAGGGCG TTAGCACCTT CTTTGCGCAA CTGTTGGCCG ATGATGTGGC CGAGTACTCC 
GCAGAAGTAG CTGTTGTCAC ATTTGGCGGC AATGTCGACA TGGCTGTCGA CTTCGCTGCG 
GTCACAAGGC AGACAGTCCC GTCTTTGACA GCTGGTGGAA TGACCCCCAT GGGCGAAGCG 
GTGGAGACGG CGCTTGAACT CCTGCATACT CGCAAGGAGG AGTACAAGCG TGCCGGGGTG 
GACTACTACC AGCCTTGGCT CGTGATTATG ACCGACGGTG CGCCAACGGA CAATATTTCC 
AAGGCTAGTC GTTTGGTCGA TGATCTTGTG CGGGAGAAGA AACTAGCAGT GTTCGCCATC 
GGCATCGGCA AAGATGCCGA TATGAACGAA CTTGCAAAGC TGTCTGGCGG TCGGCCCCCA 
TTGAAGCTGA AGGGCTTGGA ATTCGGTCAA TTCTTCCTGT GGCTCAGTGC TTCAGTCGGA 
CGGGTTTCGC AATCTGTGCC AGGCAATAAA GTTGACCTCG ATCCGGTGGC CGCATGGGCC 
AGCGTGTGA 

 

Protein sequence

MNDDLILRQE ALVENPTARL PVCLVLDTSA SMTGAPITEL QEGVSTFFAQ LLADDVAEYS 
AEVAVVTFGG NVDMAVDFAA VTRQTVPSLT AGGMTPMGEA VETALELLHT RKEEYKRAGV 
DYYQPWLVIM TDGAPTDNIS KASRLVDDLV REKKLAVFAI GIGKDADMNE LAKLSGGRPP 
LKLKGLEFGQ FFLWLSASVG RVSQSVPGNK VDLDPVAAWA SV