Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1682 |
Symbol | |
ID | 3717987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 273238 |
End bp | 274956 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640069839 |
Product | two-component sensor histidine kinase |
Protein accession | YP_351731 |
Protein GI | 77462227 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCG TGCGGATCTT CGGCCGGTCC AGGGCCGACG ACGGGGCCTC CGCGCACCGT CCGGGCGACG TGATCCTCGG CGAGGACTGG ACGGCGCCCG GTGCAGATGG CGAGCCGGGG CTTCAGAAGC GGCGGCGGCG CGGCTTCGTC GCGCTGAATC GGTCGCCGCT GGCCCGCAAG ATCATCCTCT TCAATCTTCT GGCTCTGGTG ATCCAGGTCT CGGGCGTGCT CTTCACCAAC CCGTTCCGCG AGAACCTCGT CCTCCAGCGC GAGCGGGCGC TCGTCTCCGA GGCCCGCCTC GTGGCCAATG TCTTCGAGGC GCGGCTCGCG GCGGTGCCGG GCGCGACGCT CGACGCGCCG AAGGGCATCG ACATCCCCGC CACGCTCGAC GCCGTGGCAG TTGACCCTGC GGTCGACCTC TTCATCCTCG ACACGGCGGG GGTCGTCGTG GCGTCCGACC GTGGCGCCCG CCAGCCGGTG CCCGAGGACC GGCGGTCGAC CCTCATCACC GATTTCCTCA ACGGGCTGTG GGACACTGTC TCGAAGACGC TGGCTTGGGG TGAGGCGCCG CAGGGCGAGA TCGACGCCAG CGCGCTCGCC CGCCAGGTCT TCTCGGGGGC GCGCGAGGGG CGGACCACGA TCAACACGGG GCGCGACCGC AACGGCGGCG CGCTCTTTTC GGTCGCGACC CCCATCCTCG ACGGAGAGCG CGTGATGGGG GTGGTGGCCA TCACCTCGGC CGCAGGCGAA ATCGACCGGC TGGTGCGCTA CGAGCGCGAG CAGATCCTGC AGATGTTCGT GGTGGCGCTC TTCGTCTCCA TCGGGCTCAG CCTCGTGCTG GCCTCGACCA TCGCCAATCC GCTGGCCGAT CTCGCGGCCG CGGCCGAACT CGGCCGGGAT CGCGACGCGC GCAAGATGGC GCCGGGCCGG GTGCGGATCC CGGATCTCAC GGCACGCCCG GACGAGATCG GCCGCCTGTC CATCGCCATG CGCGGGATGG TGGCGGCCCT CTACGACCGG ATCGACGCGA ACGAGCAGTT CGCGGCGGAT GTGGCGCACG AGATCAAGAA CCCGCTCGCC TCGCTCAGGT CGGCCGTGGG CACCATGCGG CTGGCCAGGC GCGAGGACCA GCGCGAGCAG CTCCTCGACG TGATCGAGCA TGATGTGCGC CGCCTCGACC GGCTGGTCAG CGACATCTCG AACGCCTCGC GCCTCGACAG CGAGCTGGTG AAGGAGGAGG AGGAGGAGTT CGACCTGCTC CCCACCATCG CGAACCTCGG CGACTATCTC GGCCGGCAGG CGGCGGAGAA GGGGGTGGAC TTCATCGCCG ACCTGCCGTC CGAACCCATG CGCATCCGCG GGCTCGAGGC GCGGCTGGCA CAGGTCTTCG TCAATCTCAT CTCCAACGCT CTTTCCTTCT GCGAGGAGGG CGATGCGGTG CGCGTCTGGG CGCGGCGGCG CGAGAACCGG GTGCTGGTCG TGGTCGAGGA CACCGGCCCC GGCATCCCCG AGGAGGCGCT GACGAAGATC TTCGGCCGCT TCTATTCCGA GCGCCCGCCG GGCCAGTTCG GCAACCACTC GGGGTTGGGA CTCGCGATCT CCAAGCAGAT CGTCGAGGCG CACGGCGGCG TGATCTGGGC CGAGAACATC CGCCCCACCA GCGCCGACAT CACCTCCGAG CCGCTGGGCG CGCGCTTCGT CGTCGGCCTG CCGGTGTGA
|
Protein sequence | MTAVRIFGRS RADDGASAHR PGDVILGEDW TAPGADGEPG LQKRRRRGFV ALNRSPLARK IILFNLLALV IQVSGVLFTN PFRENLVLQR ERALVSEARL VANVFEARLA AVPGATLDAP KGIDIPATLD AVAVDPAVDL FILDTAGVVV ASDRGARQPV PEDRRSTLIT DFLNGLWDTV SKTLAWGEAP QGEIDASALA RQVFSGAREG RTTINTGRDR NGGALFSVAT PILDGERVMG VVAITSAAGE IDRLVRYERE QILQMFVVAL FVSIGLSLVL ASTIANPLAD LAAAAELGRD RDARKMAPGR VRIPDLTARP DEIGRLSIAM RGMVAALYDR IDANEQFAAD VAHEIKNPLA SLRSAVGTMR LARREDQREQ LLDVIEHDVR RLDRLVSDIS NASRLDSELV KEEEEEFDLL PTIANLGDYL GRQAAEKGVD FIADLPSEPM RIRGLEARLA QVFVNLISNA LSFCEEGDAV RVWARRRENR VLVVVEDTGP GIPEEALTKI FGRFYSERPP GQFGNHSGLG LAISKQIVEA HGGVIWAENI RPTSADITSE PLGARFVVGL PV
|
| |