Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1120 |
Symbol | |
ID | 3720704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2882283 |
End bp | 2883584 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640072351 |
Product | HlyD family protein secretion protein , membrane fusion protein |
Protein accession | YP_354206 |
Protein GI | 77464702 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.121585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG CCGGCTCCTG GGACGACCCT GCTCCCCCGA GTTACCGCCC CATCTTTCAG GCGGCGCTGG TCCTCATCCT GTCCCTCACC GTATCGTTGG GCAGCTGGGC GGTCTACGCC CGGCTCGACG GTGCGGTCAT CACCCAGGGC GTCGTCCTGG CCGAAAGCCG CCGCAAGACC GTCGAGAACC TCGAGGGCGG CCTCCTTGAG CGGCTTCTGG TGGCGCCGGG AGACAGGGTC GCCGCCGGTC AGCCCGTAGC CCAGCTCGCC ACCGTCCAGG ACCGCGAGCG GCTGATCCAG CTCGAGGCCG AGCGGGAGGG GCTGCTCTTC GACATCTGGC GCCTGCGGAC CGAAGCCGCC GGCGCCAGGG TCCTCGATCC CGCCACGGCG CCGGGTCCCG ACGCCGAGCG GACGGCCGCG CAGCTGCGGC TCTTTCAGAG CCGCCTCCAT GCGCACCGCG ACCGGATCGG ATCGCTCGAC CGCCAGATCG AGCTTCTGAT CGCTCAGGGA GCGGCGAACG ATGCACAGGC GCGGGCTGCG GATCTCCAGA TCGAAAGCTG GCGGGCGGAG CGGGCCGACC TCGTGACGCT GGTCGATCGG GGCGCAAGTC CGCGCCAGAA ACTCGTCGAA CTCGATCGCA ACATCACGAC GCTGACGGGA ACGCGCGAGC AATATCTGGC TCTTGCCCGG GCGGCGCGGG CCGATGTCGA GCGGGCCCGG ATGGATCGCT CCACCGCCGG TCAGCTGCGT CTGGCCGAGG TGGCCGAGCA GCTCGCCGCT GCCGGGAGGC AGCTTCCCGG GCTCGAGGCC CAGATCCGCG CCACGCGCGA CGTGCTCGAA CGTCGAACGC TGCGGGCCCC ACAGGCGGGA CTGGTGGTCG AGGTACCCAC CGTGACGCCC GGCGCCGTGA TCGGCTCCGG AACGGCCGTG ATGGAGATCG TGCCCGATCT CGATCACCTC GTGATCCAGA TGCGCGTGCC GCCCGAGGCC ATCGACAACG TCCGCAAGGG CGGGCTGGCG CGGGTGCGGC TGACGGCCTA TCGGCGCGCC CTGGCGCCGG TCGTCCGCGG GCAGGTCTCC TTCGTCTCGC CGGATCTCAT CGAGGATCCG CGCGACGGCA CGACCTATTT CGAGGCTCGG GTGACGCTCG ATCCCGAGTC GCTTGCCGAG CAGCCCGACT GGGTGCGGCT CAGCGCGGGA ATGCCGGTCG AAGTGTCGGT CAGCACAGGC GAACGGCGGG CGGGGGATTA TCTGCTCGAG CCGATCCTCC GCCACCTGCG CGGCGCCCTG CACGATCCCT GA
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Protein sequence | MSAAGSWDDP APPSYRPIFQ AALVLILSLT VSLGSWAVYA RLDGAVITQG VVLAESRRKT VENLEGGLLE RLLVAPGDRV AAGQPVAQLA TVQDRERLIQ LEAEREGLLF DIWRLRTEAA GARVLDPATA PGPDAERTAA QLRLFQSRLH AHRDRIGSLD RQIELLIAQG AANDAQARAA DLQIESWRAE RADLVTLVDR GASPRQKLVE LDRNITTLTG TREQYLALAR AARADVERAR MDRSTAGQLR LAEVAEQLAA AGRQLPGLEA QIRATRDVLE RRTLRAPQAG LVVEVPTVTP GAVIGSGTAV MEIVPDLDHL VIQMRVPPEA IDNVRKGGLA RVRLTAYRRA LAPVVRGQVS FVSPDLIEDP RDGTTYFEAR VTLDPESLAE QPDWVRLSAG MPVEVSVSTG ERRAGDYLLE PILRHLRGAL HDP
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