| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0180 |
|---|
| Symbol | |
|---|
| ID | 3719506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1896679 |
|---|
| End bp | 1897530 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640071385 |
|---|
| Product | ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit |
|---|
| Protein accession | YP_353253 |
|---|
| Protein GI | 77463749 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.105797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG TGTTCCTCGC CCTCGTCACC TGGGTCGTGA CGCTCGTGCT CAATGTGCGG
ATCTCGCGGT CGGCCTTCTC CGAGACGCGG ATCGGCCGCC TCGTGGTGCC CGCGATCTTC
GGGCTCACCG TGCTTCTGGT CTGGGAGCTG CTGGTGCGCG GGCTTCAGGT GCCCTCGGTG
ATCCTGCCGC CGCCCTCGGC CATCGGCGCG CGGATCGCGA GCAGCCTGCC GGTCCTCTGG
GGCGATTTCG TGCAGACCTT CGTGAAGGGC GCGCTCTCGG GCTGGCTCAT CGGCTGTGCG
GCCGCGGTGG CCACGGCCAT CGCCATCGAC CGCTCGCCCT TCCTGCAGCG GGGGCTGCTG
CCGGTGGGCA ATTTCGTGGC GGCCCTGCCC ATCGTTGGGA TCGCGCCGAT CCTCGTCATG
TGGTTCGGCT TCGACTGGCA GTCGAAGGCC GCGGTGGTGG TGGTCATGGT CTTCTTCCCC
GTGCTCGTGA ACACGGTCGA GGGGCTCGCG GCCACCGACC GGATGCAGCG CGACCTGATG
AAGACCTATT CGGCCAGCTA CGCCCAGACG CTCCTCAAGC TGCGGCTGCC CGCGGCCATG
CCCTTCATCT TCAACGGCCT GAAGATCGCC ACCACGCTCG CCCTGATCGG GGCCATCGTC
GCCGAATTCT TCGGCAGCCC GATCCGCGGC ATGGGCTTTC GCATCTCGGC CGAGGTCGGC
CGCCTCGGGC TCGACATGGT CTGGGCCGAG ATAGCGGTTG CAGCAATGGC GGGCTCGGCC
TTCTATGGGG TGGTCGCTCT GGTCGAACGA GGGCTGACCT TCTGGCACCC GTCCCAACGA
CGTCAACGAT AG
|
|---|
| Protein sequence | MTLVFLALVT WVVTLVLNVR ISRSAFSETR IGRLVVPAIF GLTVLLVWEL LVRGLQVPSV
ILPPPSAIGA RIASSLPVLW GDFVQTFVKG ALSGWLIGCA AAVATAIAID RSPFLQRGLL
PVGNFVAALP IVGIAPILVM WFGFDWQSKA AVVVVMVFFP VLVNTVEGLA ATDRMQRDLM
KTYSASYAQT LLKLRLPAAM PFIFNGLKIA TTLALIGAIV AEFFGSPIRG MGFRISAEVG
RLGLDMVWAE IAVAAMAGSA FYGVVALVER GLTFWHPSQR RQR
|
|---|
| |