| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05537 |
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| Symbol | RSp0086 |
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| ID | 1222489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 95092 |
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| End bp | 97386 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239945 |
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| Product | putative RHS-related protein |
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| Protein accession | NP_521647 |
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| Protein GI | 17548307 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.285743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGC ACAACCTCTA TCGGGCGATC AGTGCCGCGG TCCTGCTCAC GTTGAGCACG
CAAGTGCTGG CCCAGACGCA AGTCTCAACG ACGCAATATG CCTACGACAC GGTCGGCAAC
CTGACGCAAA TCACCGACCC GCGTGGGCTG GTGACGACGC TGACCTACGA CGCCCTGGGT
CGGCGCACGC AGGTGCAAGG CCCACCGGCA GCACCGGGCG GCGGCGCCCC AGTGACGGTG
TTCAACTACG ATGGACAGGA CCGCGTGCGG CAGGTGACCG ACCCGCGCAG CCTCGTCACC
GCCTATACCG TCGACGGCCT GGGCAATACC ACCCGGCAGC AAAGCCCCGA TACCGGCACC
ACCAGCGCCA CCTACGATGT GGCCGGCAAC CTCACCCGCC GTACCGACGC GCGCGGCAAG
ATCACGAGGT ACCGCTACGA TGCCTTGAAT CGGATGACGC ATGCGGTCTT CGCAAGCGGC
ACGCCGATCG CCTTCACCTA TGACGGTGGG AAGCACCCGG AGCCGAACGA CATCGGGCAC
TTGACGCACA TCAGCGATGA GTCCGGCCAG ACACGCTGGC GATTCAATGG TTTCGGCAAC
GTGGTCCGCA AGACCCAGAG CACCACCGCC AACGGCGAGA CCAAGAAGCA AGTGGTGGCA
TACGCCTATG GCACCAGTGG CAGCAGCACC GGACACGTCA CCAGCATGAC GTATCCGAGC
AGCAGTGTCA TTGGGTACAG CTACGATGCA GGCGGCCGCA TCGCGGGCCT GACGCTGACC
ACCGCCAAAG GCAGTACCGC GCTGCTGTCC AACATCCAAT ACCAGCCCTT CGGAAAGCCA
GCAGGCTGGA CGTGGGGAAA CGGCACAGCC TATACGCGTA GCTTCGACCT GAGCGGCCGG
CTGACCCAGT TCCCGCTGGG CGCGACCACC GGCACCGGCG CGACGCCCAA TGGCCTGTCG
CGCACGGTCA ACTACGATGC GGCCTCGCGC ATCACCGCGT ACACGCACGC GGACACCAGC
GGCAGCACCG GCAGCAGCAC GGCGACGGCA GCCAACCAGA CCTTCGGCTA CGACGACCAG
GACCGGCTGA TCAGCTACCT GCCGGCCAAC AGCAGCCAGA GCTACAGCTA CGACGCCAAC
GGCAACCGCA CGGGCCAGAC GGTCGGCGGT GCCAGCTACA CGCAGACCAT CGACCCGGCC
AGCAACCGGC AGACGGCCAG CACCGGGCCG GCAGCGACCA CGAACAGCTA CGACGCAGCA
GGTAACCAGA TCGGTGATGG CGCCACCAAG TACAGCTACA GCGATCGAGG CAGGCTGGCC
AGCGTTACCA AGAACGGCAT TACCACGAGC TACCTGTATA ACGGGCTAGA ACAGCGGGTG
GTCAAGAGCG GAACGAATGT GCCCACCGGC GCCACCCGAT ACGTCTATGA CGAAGCGGGC
CATCTGATTG GGGAATACGA TCAGTCGGGC AACGCGATCC AGGAGACGGT GTACCTGGGC
GACACGCCCG TCGCGACGGT CAAGAATGGT ACGGCGTACT ACATCTACGC GGATCAGATC
GACACGCCGC GGGTGATCAC GGACACCAAC AACCTGATGG TGTGGAGGTG GGATCAGGCT
GATCCGTTCG GGGCGATGCT GCCGGATGAG AACCCGACCA GCCTCGGCAG CTTCACGTAC
AACCTGCGCT TCCCCGGGCA GGTTTACGAT GCGGAGACGG GCAAGCACTA CAACGTCAAT
CGAGACTATG ATCCTGTGGG TGGACGCTAC ATCCAGTCCG ATCCCATTGG GCTCAATGGG
GGGCAACCGT CGACCTACGC ATATGTTGGT GGACAACCAA CTCGGTACAC CGACCCGAAG
GGGTTGTGCA TCGGGCCGTT GGCGATAGTC TGCGTGGTGC TGGCGGAGAA AGGGGTCGAG
ATTGCTGCCC TTGCTGAGCT TGGGGCAGTC ATTGCTACCG GTACAGCATC TCCCGTTTCC
AGTGCGGTAT CGTTCCCGGG GCGGGCTGCT CAGGAATTGG CGAATGACGT CTATCTTGGA
ATAAGAGACG GGAAGATTGC TTATGTCGGA ATCTCGAATA ACGTCGCGGC GCGGGCCTGC
CAGCACGGAA GTCGATTCGA TGATGTGGTA AAACTCACGA GTTCTCAAGT GACTCGCGAT
CAAGCGCGAG CAATTGAGCA GACAATCATT AATCACAATC CTCAACTTGA AAATCAGATC
AATTCGATCG CCCCTTCTAG GGATTGGTAC GAACCCGCGT TGGAGTGGGC GAGAAATTGG
ATGCGTGATA ACTAA
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| Protein sequence | MREHNLYRAI SAAVLLTLST QVLAQTQVST TQYAYDTVGN LTQITDPRGL VTTLTYDALG
RRTQVQGPPA APGGGAPVTV FNYDGQDRVR QVTDPRSLVT AYTVDGLGNT TRQQSPDTGT
TSATYDVAGN LTRRTDARGK ITRYRYDALN RMTHAVFASG TPIAFTYDGG KHPEPNDIGH
LTHISDESGQ TRWRFNGFGN VVRKTQSTTA NGETKKQVVA YAYGTSGSST GHVTSMTYPS
SSVIGYSYDA GGRIAGLTLT TAKGSTALLS NIQYQPFGKP AGWTWGNGTA YTRSFDLSGR
LTQFPLGATT GTGATPNGLS RTVNYDAASR ITAYTHADTS GSTGSSTATA ANQTFGYDDQ
DRLISYLPAN SSQSYSYDAN GNRTGQTVGG ASYTQTIDPA SNRQTASTGP AATTNSYDAA
GNQIGDGATK YSYSDRGRLA SVTKNGITTS YLYNGLEQRV VKSGTNVPTG ATRYVYDEAG
HLIGEYDQSG NAIQETVYLG DTPVATVKNG TAYYIYADQI DTPRVITDTN NLMVWRWDQA
DPFGAMLPDE NPTSLGSFTY NLRFPGQVYD AETGKHYNVN RDYDPVGGRY IQSDPIGLNG
GQPSTYAYVG GQPTRYTDPK GLCIGPLAIV CVVLAEKGVE IAALAELGAV IATGTASPVS
SAVSFPGRAA QELANDVYLG IRDGKIAYVG ISNNVAARAC QHGSRFDDVV KLTSSQVTRD
QARAIEQTII NHNPQLENQI NSIAPSRDWY EPALEWARNW MRDN
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