| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02337 |
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| Symbol | RSp1004 |
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| ID | 1223316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1265901 |
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| End bp | 1267898 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240869 |
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| Product | dTDP-glucose 4,6-dehydratase transmembrane protein |
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| Protein accession | NP_522565 |
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| Protein GI | 17549225 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.029341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA CACTCATTCG CCGCTTGCTG GTATTGCCAC GCCGGAGCAA AGTGCTTCTG
ATGGTGGCGA CCGACGTGAT CGTCCTGCCG CTGTGCTTTT CGCTGGCGCT GCTGCTGCGA
CGAGGCGACG CGGAACTGCT GATCCAGTAC GGCGCGTTGC CGCCGCTCAC CATCGCCGCG
CTGACCATTC CGGTGCTGTA TCTGAGCGGC CTCTATCGCA CCGTGGTGCG CTACATCGAT
ATCAAGGTTC TGTGGCTGTC CGGCATCAGC CTGGCCACCC TGATCGCGCT CACCTATTTC
GTTTCCCTTT CCATCCAGCA GGAATACCTG CCCCGAACGG GGCTGCTGAT CTACTGGTTC
ATCGCGTTCT CGTACGTGGT GATTTCGCGC TTCCTGGCGC GCACGCTGCT GCGCACGTCG
CTGTACCACA AGAACCGGGG CAACCTGACG CGCCTGGCCA TCCTCGGCGC CGGTGAAGCG
GGCGCCCAGC TGGCGCAGGC GATGCACGCG AGTGCGGGCC ACAAGGTGCT TTGCTTCTTC
GATCACGACG GCACGCTCAA CAACACCACC GTCGGTGGCC TGCCGGTCTA TGGCGTGGAC
AGGATCACCG AGCAGATCAG CAAGCTGTGC CTCGATGAGA TCGTGCTGGC CATTCCGTCC
GCCTCACCGG AGAGCCGCCG CAAGGTGCTC GAGAGCCTGC GCCGGTTTCC GGTCAAGGTG
CGTACGCTGC CGACCCTGCT CGAGCTGGTG GATGGACGGA TCACGGCGCA GTCGATCCGC
GAGATCCGCA TCGAGGATCT GCTCGGACGC GACCCCGTTC CGCCCAACAA GGCGCTCTTC
TCCAAGTGCA TCTATAGGCG GGTGGTCTTG GTGACGGGCG CCGGCGGCTC CATCGGCAGC
GAGATTTGCC GCCAGATCGC CACCCAGCGC CCGCGCAAGC TGGTGATGCT CGATCATTCC
GAATTCGCGC TGTACACGAT CGAGCAGGAA CTGCGCCAGA GCTTCCCCGA CCTGCAACTG
GCGGCACATA TCGGCTCGGT CTGCGATGTG AAGGCGGTCA CTGCCGCGGT GAGCGATCAC
GGCGTCGATA CGGTCTACCA CGCGGCGGCG TACAAGCACG TTCCGCTGGT GGAATCGAAC
ATGGCCGAGG GCATCCGCAA CAATGTGCTG GGTGCGCTCA CGGTAGCCGA GGTCTCGAGC
ACGTATGGCG TGCAGACCTG CGTGCTGGTG TCCACCGACA AGGCGGTGCG GCCGACCAAC
ATCATGGGCG CCAGCAAGCG CATGTCCGAA CTGGTCTTCC AGGCCGCCGC CGCGCGGGCG
AATACCCGCA CCACCTTCGC CATGGTGCGC TTCGGCAACG TGCTGGGCTC GTCCGGCTCG
GTGGTGCCGC TGTTCCGGCG CCAGATCGAG CGCGGCGGCC CGATCACGGT GACGCATGCC
GAAGCCGTCC GCTACTTCAT GCTGATTCCG GAGGCCGCCC AGCTGGTCAT CCAGGCTGGG
GCCATGGCCG AAGGCGGCGA AGTGTTCGTG CTGGACATGG GCAAGCCTGT ACGGATCGCC
GACCTGGCCC GCGCCATGGT CGAAATGTCG GGCCTGCAGG AGAAAACCGC CGACAATCCG
GGCGGCGACA TCGAGATCAA GGTTGTCGGC CTGCGCCCCG GCGAGAAGCT CTACGAAGAG
CTGCTGATCG GCACCGACGT CACGCCCAGC ACGCACCCGC GCATCATGTG TTCGCACGAG
CATTTCGTTC TCGAGCCGGA ATTGAAACGT TTGCTGACCG GGTTGTTCGC CGCGTGCGAA
AGCGGCGACG CGCTGCGGAT CCGCGAACAG GTGCAGGCCA TCGTGCCCGA ATACGCGCCG
TATTCCTCGC TGGATGGCCG CAAGCCGGTG GCCGTACCAG CGGAGCGCCC GCTGCTGCCG
CTGCCCCGCC CCTTCAATAT GCTCGGGCGC GGCGATGCGC AAGCCGCGCT GGATACCGCC
ACCGCAGAGG CCAGCTGA
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| Protein sequence | MTSTLIRRLL VLPRRSKVLL MVATDVIVLP LCFSLALLLR RGDAELLIQY GALPPLTIAA
LTIPVLYLSG LYRTVVRYID IKVLWLSGIS LATLIALTYF VSLSIQQEYL PRTGLLIYWF
IAFSYVVISR FLARTLLRTS LYHKNRGNLT RLAILGAGEA GAQLAQAMHA SAGHKVLCFF
DHDGTLNNTT VGGLPVYGVD RITEQISKLC LDEIVLAIPS ASPESRRKVL ESLRRFPVKV
RTLPTLLELV DGRITAQSIR EIRIEDLLGR DPVPPNKALF SKCIYRRVVL VTGAGGSIGS
EICRQIATQR PRKLVMLDHS EFALYTIEQE LRQSFPDLQL AAHIGSVCDV KAVTAAVSDH
GVDTVYHAAA YKHVPLVESN MAEGIRNNVL GALTVAEVSS TYGVQTCVLV STDKAVRPTN
IMGASKRMSE LVFQAAAARA NTRTTFAMVR FGNVLGSSGS VVPLFRRQIE RGGPITVTHA
EAVRYFMLIP EAAQLVIQAG AMAEGGEVFV LDMGKPVRIA DLARAMVEMS GLQEKTADNP
GGDIEIKVVG LRPGEKLYEE LLIGTDVTPS THPRIMCSHE HFVLEPELKR LLTGLFAACE
SGDALRIREQ VQAIVPEYAP YSSLDGRKPV AVPAERPLLP LPRPFNMLGR GDAQAALDTA
TAEAS
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