Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02081 |
Symbol | RSp1377 |
ID | 1223689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1737973 |
End bp | 1738431 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637241240 |
Product | transcription regulator protein |
Protein accession | NP_522936 |
Protein GI | 17549596 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG ATGCTATTGA TCGTCGAATT CTGAGCGCGC TGCAGCGCGA CGGGCGCCTG CAAAACATCG AACTGGCCAA GGAGGTCGGG CTGTCGCCTT CACCCTGCCT GCGGCGGGTG CGCCTGCTGG AAGAGGCCGG CGTGATCGAG CGCTATGTCG CCGTGCTCAA TCCGGCCAAG GTCGGCAAGG GGCTATCGGT GTTTGCGCGC ATCTGGCTCA AGGGACAGGA CGCGGCCACG GTGGATGCCT TCACGGCGGC CATCCAGCAG TTGCCGGAGG TGGTGGAGTG CCACCTGATG GCGGGCGACT GTGATTTCCT GCTGCGCGTG GTCGCGGCCG ATCTGGAGGA CTATCGGCAG TTCCAGATCC AGTACCTGAC CCGGATTCCC GGCGTGCAAA GCGTGAAGAC CGAGGTGCCG ATGCAGAAGA TCAAGTTGAC TTCGGCCTTG CCTGTCTGA
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Protein sequence | MEFDAIDRRI LSALQRDGRL QNIELAKEVG LSPSPCLRRV RLLEEAGVIE RYVAVLNPAK VGKGLSVFAR IWLKGQDAAT VDAFTAAIQQ LPEVVECHLM AGDCDFLLRV VAADLEDYRQ FQIQYLTRIP GVQSVKTEVP MQKIKLTSAL PV
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