| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00345 |
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| Symbol | RSp0467 |
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| ID | 1222774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 583671 |
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| End bp | 584864 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240327 |
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| Product | putative general secretion pathway GSPF-related transmembrane protein |
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| Protein accession | NP_522028 |
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| Protein GI | 17548688 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.654109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.604529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCA AGGTCAGCAC GTTCCATCCG GACACCGCGC GCGTGTCCAC GCGCACGGTC
GCGGCGGAAG ACCGCGCCTC GGTGGAAACG CGCCTGAAGG CCGAAGGCGT GATGGTCCTG
TCCGTCGAGC CGATCGAGAA CAAGCTGGCG CGTTCGCTGC AGAGCCGGCG CCGCAAGGTG
GACGCCGGGC TGGTCTGCAT CGAGTTGGGC GGGCTGCTGC GGGCCGGCCT CACCGTCTCG
GAGGCGCTGG ATTCACTGGC GCATCGCGAC GACCATCCCA ACGTCGGCGT GTATCGGCAG
CTGTACGACG GCCTGCTGAG CGGCCTGCCG TTGTCCGAAT CGATGAAGCA GGTCGAGGGG
GGCTTCCCGG GCATCCTCGT CGCCGCGATC CAGGCCAACG AACGCTCGGG GCGGATTCCG
GACGCGCTCG ACGAATACGC AAAGTACGCG CAGGCACAGG AGGCGCTGCG CAAGAAGGTC
GTCAGCGCCG CCGTCTATCC GGCAACCGTG ATCGGCTTCG GCCTGCTGGT CGTGCTGTTC
CTGCTGGCCT ATGTCATCCC CCGGTTCGCG ATGGTCTACG ACGGCACGGC GATGCAGATG
TCCGGCCCGA CGCGGATACT CCTGGCCGTC GGCCATTTCA TTCACGACCG GGGATGGGGG
CTGCTGGTCG GCATCGCCTT GCTGGGCGTG ATCGTCGCGG ATCAGTTCGC GCGCAGGAAT
GCCGCACAAC GGCTCCTGAA TGTCATCGGT GGCTTGTGGC CGTTCAAGAA GCTGGGCGAG
CGCTTCCAGC AGGCCCGCAT CTGCGCCTCG CTGGCGATGC TGACGCGCGG CGGCTACGAC
TTTCCGGAAG CGATGCGGCT GGCCTCGCCG CTGGCCATCT CGGCATCCAC GCGCGCCCAG
CTCGACGCGG CGCGCGAGCG CATCCTCGAA GGCGTGCTGG TCAGCCAGGC ACTGATGAAG
ACGGATTTCA GCGATGGCTT CGCGGTACGC ATCCTGCAGG CCGGCGAACG GGTCGGCGAT
CTTGCCGGCA GCTTCGAGAT GCTGGCGCAG ACCTACCGCC GCGAACTGGA GACCATGCTG
GAGCGGACCA TGCGCCTGGT CGAACCGATT CTGCTGATGA CGGTGGCCAG CCTGATCGGC
GCCATCGTCG TGCTGATGTA TCTGCCGATT TTCGATCTTG CGGGAGCGAT CTGA
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| Protein sequence | MRFKVSTFHP DTARVSTRTV AAEDRASVET RLKAEGVMVL SVEPIENKLA RSLQSRRRKV
DAGLVCIELG GLLRAGLTVS EALDSLAHRD DHPNVGVYRQ LYDGLLSGLP LSESMKQVEG
GFPGILVAAI QANERSGRIP DALDEYAKYA QAQEALRKKV VSAAVYPATV IGFGLLVVLF
LLAYVIPRFA MVYDGTAMQM SGPTRILLAV GHFIHDRGWG LLVGIALLGV IVADQFARRN
AAQRLLNVIG GLWPFKKLGE RFQQARICAS LAMLTRGGYD FPEAMRLASP LAISASTRAQ
LDAARERILE GVLVSQALMK TDFSDGFAVR ILQAGERVGD LAGSFEMLAQ TYRRELETML
ERTMRLVEPI LLMTVASLIG AIVVLMYLPI FDLAGAI
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