Gene RS00345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS00345 
SymbolRSp0467 
ID1222774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp583671 
End bp584864 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content67% 
IMG OID637240327 
Productputative general secretion pathway GSPF-related transmembrane protein 
Protein accessionNP_522028 
Protein GI17548688 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.654109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.604529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA AGGTCAGCAC GTTCCATCCG GACACCGCGC GCGTGTCCAC GCGCACGGTC 
GCGGCGGAAG ACCGCGCCTC GGTGGAAACG CGCCTGAAGG CCGAAGGCGT GATGGTCCTG
TCCGTCGAGC CGATCGAGAA CAAGCTGGCG CGTTCGCTGC AGAGCCGGCG CCGCAAGGTG
GACGCCGGGC TGGTCTGCAT CGAGTTGGGC GGGCTGCTGC GGGCCGGCCT CACCGTCTCG
GAGGCGCTGG ATTCACTGGC GCATCGCGAC GACCATCCCA ACGTCGGCGT GTATCGGCAG
CTGTACGACG GCCTGCTGAG CGGCCTGCCG TTGTCCGAAT CGATGAAGCA GGTCGAGGGG
GGCTTCCCGG GCATCCTCGT CGCCGCGATC CAGGCCAACG AACGCTCGGG GCGGATTCCG
GACGCGCTCG ACGAATACGC AAAGTACGCG CAGGCACAGG AGGCGCTGCG CAAGAAGGTC
GTCAGCGCCG CCGTCTATCC GGCAACCGTG ATCGGCTTCG GCCTGCTGGT CGTGCTGTTC
CTGCTGGCCT ATGTCATCCC CCGGTTCGCG ATGGTCTACG ACGGCACGGC GATGCAGATG
TCCGGCCCGA CGCGGATACT CCTGGCCGTC GGCCATTTCA TTCACGACCG GGGATGGGGG
CTGCTGGTCG GCATCGCCTT GCTGGGCGTG ATCGTCGCGG ATCAGTTCGC GCGCAGGAAT
GCCGCACAAC GGCTCCTGAA TGTCATCGGT GGCTTGTGGC CGTTCAAGAA GCTGGGCGAG
CGCTTCCAGC AGGCCCGCAT CTGCGCCTCG CTGGCGATGC TGACGCGCGG CGGCTACGAC
TTTCCGGAAG CGATGCGGCT GGCCTCGCCG CTGGCCATCT CGGCATCCAC GCGCGCCCAG
CTCGACGCGG CGCGCGAGCG CATCCTCGAA GGCGTGCTGG TCAGCCAGGC ACTGATGAAG
ACGGATTTCA GCGATGGCTT CGCGGTACGC ATCCTGCAGG CCGGCGAACG GGTCGGCGAT
CTTGCCGGCA GCTTCGAGAT GCTGGCGCAG ACCTACCGCC GCGAACTGGA GACCATGCTG
GAGCGGACCA TGCGCCTGGT CGAACCGATT CTGCTGATGA CGGTGGCCAG CCTGATCGGC
GCCATCGTCG TGCTGATGTA TCTGCCGATT TTCGATCTTG CGGGAGCGAT CTGA
 
Protein sequence
MRFKVSTFHP DTARVSTRTV AAEDRASVET RLKAEGVMVL SVEPIENKLA RSLQSRRRKV 
DAGLVCIELG GLLRAGLTVS EALDSLAHRD DHPNVGVYRQ LYDGLLSGLP LSESMKQVEG
GFPGILVAAI QANERSGRIP DALDEYAKYA QAQEALRKKV VSAAVYPATV IGFGLLVVLF
LLAYVIPRFA MVYDGTAMQM SGPTRILLAV GHFIHDRGWG LLVGIALLGV IVADQFARRN
AAQRLLNVIG GLWPFKKLGE RFQQARICAS LAMLTRGGYD FPEAMRLASP LAISASTRAQ
LDAARERILE GVLVSQALMK TDFSDGFAVR ILQAGERVGD LAGSFEMLAQ TYRRELETML
ERTMRLVEPI LLMTVASLIG AIVVLMYLPI FDLAGAI