| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4415 |
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| Symbol | |
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| ID | 4024940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4885955 |
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| End bp | 4887538 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964624 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_571532 |
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| Protein GI | 91978873 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.805378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CAATCGAAGC GCCGGGCGTG GTGGGACCGT TCGCCGGAAT GGACGTGCCG
TGGCTGCTGC GACTGCAGGC CGAGGCGCGG CGCGATCATC CGTTCATCAT CTGGGCGCCG
TTCGACGCGC CGGCGCGGGT CTGGAGCTAC GGCGAATTCC ACGAGCGGGT CGGCGCGCTC
GCCGCAGGCC TGGCGGCGCG CGGCGTCAAG CCCGGCGACG CGGTGCTGAT CCATCTCGAC
AATTGCGCGG AATTTCTGCT GAGCTGGTTC GCCTGCGTCG AGCTCGGCGC GCTCGCGGTC
ACCACCAACA CCCGCTCGGC CGCGGCCGAG ATCGATTACT TCGCCGATCA TTGCAACGCG
GTCGCCGCGA TCACCCAGCC GGCCTATGCG GAGCTGGTCG CCGCCAATTG CAGGAAGCTG
CGCTGGATCG CGGTGATCTC GCACGATCCC GGCGCGGCGC TGCCGGCGCA GACGGTCGCA
AAAGCGGAGT CGTTCGAGAG CCTGTTCGGC GACAGCGCCA ACCGCCCGCA GCGGCCGACC
GATCCGTTCG CGCCGTGCAG CGTGCAATAC ACCTCGGGCA CGACGTCGCG GCCGAAGGCG
GTGCTGTGGA CTCACGCCAA CGCGCTGTGG GGCGCTAAGA TCAATGCCGC GCACCAGACG
CTACGCGCCG ACGACGTCCA CCTCGCTTAC TTGCCGCTTT TCCACACCAA CGCGCTGGCC
TATTCGATGC TGGCGAGCCT GTGGGTCGGT GGAACCTGCG TGGTGCAGCC GCGGTTCTCC
TCGAGCCGGT TCTGGAGCGT CTCGCTGGAG CATCGCTGCA CCTGGAATTC CAACATCCCG
TTCTGCCTGA AGGCTCTGAT GGAGCAGGAG ACGCCGAAGC ATCACAGCTT CCGGATGTGG
GGCACCGCCG TGGCCGAGCC GCCGGCCTTC GCGGCGTTCG GCGTCAAGAT CATCGGCTGG
TGGGGCATGA CCGAGACCAT CACCCACGGC ATCATCGCCG AGGCCGACCA GCCGAATACG
CCGATGACGA TCGGCCGCGC CGCGCCGGAG TACAGCCTGC GCGTCGTCGG CGACGACGGC
GTGCCGACGC AGGTCGGCGA CACCGGAAAT CTGCTGATCA AGGGCGTGCC CGGACTGTCG
CTGTTCAAGG AGTATCTGCA CAACGGGCAG GCCACGCGCG ACAGCTTCGA CGAACACGGC
TACTTCATCA CCGGCGACCG CGTCACGCTG CTCGAGCGCG GCGCGATCAA GTTCGGCGAC
CGCTCCAAGG ACATGCTCAA GGTCGGGGGC GAGAACGTCT CCGCGTCCGA GATCGAGCAG
GTGGTGATCA CCGTTCCCGG CGTCCGCGAG GCCGCAGTGG TGGCGAAGAA GCACCCGATG
CTCGACGAGG TGCCGGTGGC GTTCGTGATC CCGACCGCCG GCGTCGGCAA CGCCGCGCCT
GACCTCGCCG ATCGCATCAT GGCGATCTGC ACCAAGTCGC TCGCCGATTT CAAGCGCCCG
CGCGAAATCC GCCTCGTCGA CGAGATGCCG CGATCGACGC TGGAGAAGGT CGCGAAGGCC
GAATTGCGCA AGATGCTGGA GTGA
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| Protein sequence | MPQPIEAPGV VGPFAGMDVP WLLRLQAEAR RDHPFIIWAP FDAPARVWSY GEFHERVGAL
AAGLAARGVK PGDAVLIHLD NCAEFLLSWF ACVELGALAV TTNTRSAAAE IDYFADHCNA
VAAITQPAYA ELVAANCRKL RWIAVISHDP GAALPAQTVA KAESFESLFG DSANRPQRPT
DPFAPCSVQY TSGTTSRPKA VLWTHANALW GAKINAAHQT LRADDVHLAY LPLFHTNALA
YSMLASLWVG GTCVVQPRFS SSRFWSVSLE HRCTWNSNIP FCLKALMEQE TPKHHSFRMW
GTAVAEPPAF AAFGVKIIGW WGMTETITHG IIAEADQPNT PMTIGRAAPE YSLRVVGDDG
VPTQVGDTGN LLIKGVPGLS LFKEYLHNGQ ATRDSFDEHG YFITGDRVTL LERGAIKFGD
RSKDMLKVGG ENVSASEIEQ VVITVPGVRE AAVVAKKHPM LDEVPVAFVI PTAGVGNAAP
DLADRIMAIC TKSLADFKRP REIRLVDEMP RSTLEKVAKA ELRKMLE
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