Gene RPD_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4357 
Symbol 
ID4024882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4820943 
End bp4821830 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID637964567 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_571475 
Protein GI91978816 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00044284 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCGAGGGTGA ATTCTCGCCC GCGTTCGAGA TTGCCGAGCC TGCCGTCTGG 
CGCGCGCCGA TCATTTTCAA TTCGCCGCAC TCCGGTTCGG TTTACCCGAA CGCCTTTCTC
AACGCATCCC GGATCGACCT CGAGGCGCTG CGGCGCTCCG AGGATTCGTT CGTGGACGAG
TTGATCTCGC ACCTTCTCCA CCAGGGCTTT CCGGTCGCCA GAGTGCACTT CCCGAGGTCC
TATATCGACG TCAATCGGGA GCCCTATGAA CTCGATCCGC GGATGTTCCA CGGCCGGTTG
CCGAGCTTCG CCAACACCCG CTCGATGCGG GTTGCCGGCG GATTGGGAAC GATTCCCCGC
GTGGTCGGCG ACGGCCAGGA GATTTACCGC GAACGGATCC CGATCGACGA GGCGCTCGGC
CGGATCGAGA CGCTGTACAA GCCCTATCAC CGCGCGCTGC GCCAGCTGGT CAACCGGGCG
CACCAGACCT ACGGCGCCGT GATCCTGGTC GATTGCCACT CGATGCCCTC TGTGGGCATC
GCCCGTGACG AGCCGCGACG GCCCGATATC GTGATCGGCG ATCGCTACGG GACGAGCTGC
GCCGCGCTGA TCTCGGGCGT GGTCGAGGAA ACGATGGCGG CACGCGGCTA TACGGTCGGC
CGCAACAAGC CCTATGCGGG CGGCTTCATC ACCGAGCATT ACGGCAATCC GGCGAGCGGC
CTGCATACCG TGCAGGTCGA GCTCAACCGC GCGATCTATA TGGACGAACG GCTGCGGCAG
CGGAGCGATC GGTTCGGCGT TGTCGCGGAA GATTTCAGCG TTCTGGCCGA AGCCCTCGCG
GCGATCCCGC TGGCCGATCT CGGCCCGTTC CAGGCTGCCG CCGAATAA
 
Protein sequence
MTEFEGEFSP AFEIAEPAVW RAPIIFNSPH SGSVYPNAFL NASRIDLEAL RRSEDSFVDE 
LISHLLHQGF PVARVHFPRS YIDVNREPYE LDPRMFHGRL PSFANTRSMR VAGGLGTIPR
VVGDGQEIYR ERIPIDEALG RIETLYKPYH RALRQLVNRA HQTYGAVILV DCHSMPSVGI
ARDEPRRPDI VIGDRYGTSC AALISGVVEE TMAARGYTVG RNKPYAGGFI TEHYGNPASG
LHTVQVELNR AIYMDERLRQ RSDRFGVVAE DFSVLAEALA AIPLADLGPF QAAAE