| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4221 |
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| Symbol | |
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| ID | 4024742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4686158 |
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| End bp | 4688068 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964427 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_571339 |
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| Protein GI | 91978680 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.409374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.719321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCC ATGACAAGAG CCGTTACCAC GAGGTTCATG CCCGTTCGCT CGCCGATCCC
GAGGGCTTCT GGGCCGAGGC CGCGCGCGAG ATCGACTGGA TCGAGCCCGC CACGAAGGTG
TTCGATCGCT CGCAGGGGCT GTACGGCCGC TGGTTCGCCG GCGCCAAGGT CAACACCTGC
TACAATGCGC TCGACCGCCA TGTCGCCAAC GGCCGGGCCG ACCAGGTCGC GCTGATCCAC
GATTCGCCGC TGACCGGCAG CATCAGCCAG TTCACTTATG CGGAGATGTT GCGCGAAGTG
CAGGCGCTGG CCGCGGTGAT GCAGGATTTC GGCGTCGCCA AGGGCGACCG CGTCATCCTC
TATATGCCGA TGGTGCCGGA ATCGATGGTG GCGATGCTGG CCTGCGCCCG CATCGGCGCG
GTGCATTCGG TGGTGTTCGG CGGCTTCGCG GCCAAGGAAC TCGCCACCCG CATCGACGAC
GCCAAGCCGA AGCTGATCCT GTCGGCGAGC TGCGGCATCG AGCCCGGCCG CATCGTCAAG
TACAAGCCGC TGCTCGACGA AGCGATCAAA CTATCCACCG CCAAGCCCGA CGCCTGCATC
ATCCTGGCGC GGCCGCAGCA GGATTGCGAG CTGATCGAAG GCCGCGATCA TGATTGGGCC
AAACTGCGCT CCGAGGCGCT GGCCGCCGAC AAGAAGGCCG ATTGCGTCGC GGTCGACGCC
ACCGATCCGC TGTACATCCT CTACACCTCG GGCACCACCG GCAAGCCGAA GGGCGTAGTG
CGCGACAATG GCGGTCATCT CGTCGCGCTG AAATGGACGA TGGAGAACCT CTACGGCGTC
AAGCCGGGCG AGGTGTGGTG GTGCGCGTCC GACATCGGCT GGGTGGTCGG CCACAGCTAC
ATCATCTACG GCCCGCTGCT CCACGGCGCG ACCTCGATCA TGTATGAAGG CAAGCCGGTC
GGCACCCCGG ACGCCGGCGC GTTCTGGCGG GTGATTTCCG AGCACGGCGC GGTGGCGCTG
TTCACGGCGC CGACCGCATT CCGCGCCATC CGCAAGGACG ATCCCGAAGG CAGCTTCATC
CGCAAATACG ATCTGTCGAA GCTGCGTACG CTGTTCCTGG CCGGCGAACG CGCCGACCCG
CCGACGGTGG AGTGGGCCGA ACAGCAGCTC AAGGTGCCGG TGATCGATCA CTGGTGGCAG
ACCGAAACCG GCTGGTGCAT CGCCGGCAAC CCGGTCGGCC TCGGCCTGCT GCCGGTCAAG
CACGGCTCGC CGACGGTGCC GATGCCGGGC TACGACGTTC AGGTGGTCGA CGAGGGCGCA
CGGCCGTTGC CCGCCGGCAC GATGGGCTCG ATCGTGATCA AGCTGCCGCT GCCGCCCGGC
TGCCTGCCGA CGCTGTGGCA GCAGGACGAG CGCTGCCGCG AAAGCTACTT CGCCGACTAT
CCCGGCTTCT ACAAGACCTC CGACGCCGGC TACATGGACG AGGACGGCTA CGTCTTCGTG
ATGGGCCGCA CCGACGATAT CATCAACGTC GCCGGCCACC GGCTCTCGAC CGGCGGCATG
GAGGAGATCC TGGCCTCGCA TCCGGACGTC GCCGAATGCG CCGTGCTCGG CATCAACGAT
ACGATCAAGG GCGAGGTGCC CTGCGGTCTG ATCGTGCTGA AGAGCGGCGT CACCCGCGAT
CACGCCGAGA TCGAGAAGGA GATCGTCAAG CTGGTGCGCG ACAAGCTCGG CCCGGTCGCG
GCCTTCAAGC TGGCGATCAC CGTGCCGCGG CTGCCCAAGA CCCGCTCCGG CAAGATCCTG
CGCGGCACCA TCAAGAAGAT CGCCGACGGC GACGAATGGG CGATGCCTGC GACGATCGAG
GACCCGACCG CGCTCGACGA CATCAGCACC GCGCTGAAGA ACCATAGCTG A
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| Protein sequence | MNSHDKSRYH EVHARSLADP EGFWAEAARE IDWIEPATKV FDRSQGLYGR WFAGAKVNTC
YNALDRHVAN GRADQVALIH DSPLTGSISQ FTYAEMLREV QALAAVMQDF GVAKGDRVIL
YMPMVPESMV AMLACARIGA VHSVVFGGFA AKELATRIDD AKPKLILSAS CGIEPGRIVK
YKPLLDEAIK LSTAKPDACI ILARPQQDCE LIEGRDHDWA KLRSEALAAD KKADCVAVDA
TDPLYILYTS GTTGKPKGVV RDNGGHLVAL KWTMENLYGV KPGEVWWCAS DIGWVVGHSY
IIYGPLLHGA TSIMYEGKPV GTPDAGAFWR VISEHGAVAL FTAPTAFRAI RKDDPEGSFI
RKYDLSKLRT LFLAGERADP PTVEWAEQQL KVPVIDHWWQ TETGWCIAGN PVGLGLLPVK
HGSPTVPMPG YDVQVVDEGA RPLPAGTMGS IVIKLPLPPG CLPTLWQQDE RCRESYFADY
PGFYKTSDAG YMDEDGYVFV MGRTDDIINV AGHRLSTGGM EEILASHPDV AECAVLGIND
TIKGEVPCGL IVLKSGVTRD HAEIEKEIVK LVRDKLGPVA AFKLAITVPR LPKTRSGKIL
RGTIKKIADG DEWAMPATIE DPTALDDIST ALKNHS
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