Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4152 |
Symbol | |
ID | 4024674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4622900 |
End bp | 4623172 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964360 |
Product | alkylhydroperoxidase AhpD core |
Protein accession | YP_571272 |
Protein GI | 91978613 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0101808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGC GCCTGAACCC GATCGCCGCC GCGCCCGACG CCTACAAGGC GATGGTCGCG CTGGAGACCT ATCTCAAGGG CAGCGGGCTC GAATCGAGCC TGATCGAACT GGTGAAGATG CGCGCCTCGC AGATCAACGG CTGCGCGTTC TGCCTCGACA TGCACAGCAA GGATGCCCGC GCCCATGGCG AGACCGAGCA GCGGCTGTAT CTGCTCGATG CCTGGCGGGA GTCGCCGGCG CGTTCTTCGA GGCCTCGCGC AGCGGCGATC TGA
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Protein sequence | MKPRLNPIAA APDAYKAMVA LETYLKGSGL ESSLIELVKM RASQINGCAF CLDMHSKDAR AHGETEQRLY LLDAWRESPA RSSRPRAAAI
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