| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4116 |
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| Symbol | |
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| ID | 4024638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4580822 |
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| End bp | 4581577 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964324 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_571236 |
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| Protein GI | 91978577 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAT ATGATTTTCG CAGCCCCCGT TTGTTCGTCG ACGCCGCGCT CGCCCCCGGT
GCACGAGTGC CGCTCGATCG CGACCAGAGC AATTATCTCG GCAATGTGCT GCGGCTGGGC
GCAGGCGCGC CCGTTCTGAC CTTCAACGGC CGCGACGGCG AATGGCGCGC CGCGATTGCC
GGCCGCAAGC GGCCCGAGGA ACTGGAGGTG ACGGACCAGA CCCGTCCGCA GGATCGCCTG
CCCGATCTGA CCTATGTGTT TGCGCCGCTG AAACATTCGC GGCTGGATTA TATGACGCAG
AAGGCCGTCG AAATGGGCGC CGGCCGGCTG CAGCCGGTGC TGACGCGGCA CACCCAGGTA
CACCGGCTCA ACACCGACCG GATGCGGGCC AATGCGATCG AAGCGGCCGA ACAATGCGGC
ATTCTCAGCG TCGCAGCGGT CGAGGAGTCG ATCGCGCTGG AGCGCTGGCT CGCCGCGCGC
GCCGATGGCG GCCGTCTGCT GGCGTTCTGC GACGAGGACG CAGAGATCGC CGATCCGGTC
GCGGCGCTGC AGGGCGCGCG CGCCACCGCG GCGCAGGGAA TCGACCTGCT GGTCGGCCCG
GAAGGCGGAT TTTCCAACGA GGAACGTGAG CTTCTGCTGC GGCAGCCGAA CATTCTGCGG
CTGGCGCTCG GGCCGCGGAT CATGCGGGCC GACACCGCCG CGGTCGCGGC GCTGGCGCTG
GTCCAGGCCG TGATCGGCGA CTGGAGCGGC AATTAG
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| Protein sequence | MSRYDFRSPR LFVDAALAPG ARVPLDRDQS NYLGNVLRLG AGAPVLTFNG RDGEWRAAIA
GRKRPEELEV TDQTRPQDRL PDLTYVFAPL KHSRLDYMTQ KAVEMGAGRL QPVLTRHTQV
HRLNTDRMRA NAIEAAEQCG ILSVAAVEES IALERWLAAR ADGGRLLAFC DEDAEIADPV
AALQGARATA AQGIDLLVGP EGGFSNEERE LLLRQPNILR LALGPRIMRA DTAAVAALAL
VQAVIGDWSG N
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