| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4084 |
|---|
| Symbol | |
|---|
| ID | 4024601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4540152 |
|---|
| End bp | 4541000 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637964287 |
|---|
| Product | beta-lactamase-like |
|---|
| Protein accession | YP_571204 |
|---|
| Protein GI | 91978545 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGGA CGATCGGCAA GATCAAGATC ACCAAGATCG TCGAGATCGA ATCCACCGGA
GGCACCCGGT TCATTCTGCC GCAGGCCACC AGTGAGGACA TCCGGAAGCT GCCATGGTTG
CTGCCGGACT TCGCGAACGC GGAAGGCCGG CTGAAGATGA CGGTGCACGC GCTGGTGATC
GAGACTCCGA CCAGCCGCAT CGTGGTCGAC ACCTGCATCG GCAACGACAA GCAGGGCCGC
AGCGTCCCGA CCTGGAACGG TCTCGACAAG CCGTTCCTGC AGAACATGGA AGCGGCGGGC
TATCCGGCCG ACAGCATCGA CCAGGTGATC TGCACGCATC TGCACGTCGA TCATGTCGGC
TGGAATACCC GGCTGATCGA CGGCCATTGG GCGCCGACCT TCGCCAACGC CCGCTACGTG
TTCGCCCGCA GCGAATATGA ATACTGGAAG ACGCACAGCA CCGAGGGCGA ACACGCTGCG
GTGTTTGCGG ATTCGATCCA GCCGGTGGTC GATGCCGGCA AAGTCGATCT GGTGGCGAGC
GACGCCGCGG TCGCCGACGA GATCACGCTG ATCCCGACGC CCGGCCACAG CCCCGGCCAT
GTCTGCCTGC ATATTCGTTC GGACGGCGCG GAGGCGTTGC TCAGCGGCGA CGTCGCCCAT
CACCCGTGCC AGATGGCGCA TCTGGATTGG TCGTCGCAGG TCGACTTCGA TCCGAAGCAG
TCGGCCGAGA CACGGCGCGC GCTGTTCTCG CGCTTCTCCG ACACGCCGAC GCTGGTGATC
GGCGGTCATT TCGGACCCGG CTACATCAAG CGCGACGGCG ACGCTTTTCG TTTGGTGGCA
GTGCAATAA
|
|---|
| Protein sequence | MGWTIGKIKI TKIVEIESTG GTRFILPQAT SEDIRKLPWL LPDFANAEGR LKMTVHALVI
ETPTSRIVVD TCIGNDKQGR SVPTWNGLDK PFLQNMEAAG YPADSIDQVI CTHLHVDHVG
WNTRLIDGHW APTFANARYV FARSEYEYWK THSTEGEHAA VFADSIQPVV DAGKVDLVAS
DAAVADEITL IPTPGHSPGH VCLHIRSDGA EALLSGDVAH HPCQMAHLDW SSQVDFDPKQ
SAETRRALFS RFSDTPTLVI GGHFGPGYIK RDGDAFRLVA VQ
|
|---|
| |