| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4020 |
|---|
| Symbol | |
|---|
| ID | 4024537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4467156 |
|---|
| End bp | 4468259 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637964223 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_571140 |
|---|
| Protein GI | 91978481 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.109231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.727114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGA TGAATTCGAT CCGATCCCGC CGCTGGCGAT GGTTGTCGTG GCTGCTGCCG
AATACGCTCA CTACGGTCGG CGTACTGGCC ATGGTGCTGG GCACATCGCC GGGCGTCGAT
GCTCAATTCG ACAGCATCCT GCTCGCCATT GTCATCGCCG TCGCCGCTGC CCTCGCGATC
GAGTTCCTGG TCTGCCTGTG GATCGCCCCG TCGCGGCGCG GCCGGCGCGC TTATCTGTCG
TCGAGCAAGG GAATGGTCGA CCTCGCCTGC GCGTTGGCGC TGCCGCTCGG ATGGTTGCTG
GCGCCGGATG TGCACGACGC GCGGCTGTTC GCGCTGGTCT GGACGCTGCG CTATATCAGC
CATTCCACCG GGCTGACGCT GATCTGGCGG GTGATGATTC GCAGTCGCGT CGCGCTGCTC
AGCATCGCCG GCCTGTTCCT GGTCGTCACG CTGACCGGCG CCACGCTGGC GCATGTGTTC
GAGCGCGAGG CTCAGCCCCA AATGTTCGGC AGCGTCGGCC GGGCGTTGTG GTGGGCGATC
GTGACACTCA CCACCACCGG CTATGGCGAT GTGGTGCCGA CCACGATCTG GGGCCGTCTG
CTGGCCGGCT GGGTGATGGT CGGTGGCATC GTGATGTTCG CGCTGCAGGC CGGCATCATC
GCCACCGCTT TTGCCGAAGA GCTGCAGCGG CGGCACTTTC TGCGCACCTG GGAGCTGGTC
ATCAGCGTGC CGTTCTTTCG CGATCTCGGC GCCGCGGCGG TCGCCGATAT CGTACGGCTG
CTGCAGGCGC GCGACGTCAA TGCCGGTACG GTCGTAGTCC GCGAGGGCGA GCCGGGCGAT
GCGATGTACT TCATCGTCTC GGGCGAGGCG ACCGTCCGCG TCGCGCCGAA GCCGGTGGTA
CTCGGCCCCG GCAGTTTCTT CGGCGAAATG GCGTTGCTGT TCAACACGCC GCGCTCCGCC
ACCGTGGTCG CGACCCAGCC CAGCGTGCTG CTGGTGCTGG ATATCGCCGA CTTCCATCAA
CTCGCCGGCC GCCGGCCGGA ATTCGTCAAT CTGATCGAAA CGGAAGGTAG ACTGCGGCGC
GATCAGAATG TCACCGCGGG ATGA
|
|---|
| Protein sequence | MTSMNSIRSR RWRWLSWLLP NTLTTVGVLA MVLGTSPGVD AQFDSILLAI VIAVAAALAI
EFLVCLWIAP SRRGRRAYLS SSKGMVDLAC ALALPLGWLL APDVHDARLF ALVWTLRYIS
HSTGLTLIWR VMIRSRVALL SIAGLFLVVT LTGATLAHVF EREAQPQMFG SVGRALWWAI
VTLTTTGYGD VVPTTIWGRL LAGWVMVGGI VMFALQAGII ATAFAEELQR RHFLRTWELV
ISVPFFRDLG AAAVADIVRL LQARDVNAGT VVVREGEPGD AMYFIVSGEA TVRVAPKPVV
LGPGSFFGEM ALLFNTPRSA TVVATQPSVL LVLDIADFHQ LAGRRPEFVN LIETEGRLRR
DQNVTAG
|
|---|
| |