Gene RPD_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3931 
Symbol 
ID4024447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4370000 
End bp4370941 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID637964135 
Productaldo/keto reductase 
Protein accessionYP_571053 
Protein GI91978394 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.726041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTC GTAATCTCGG GGGCAGCGGC CTGCGCGTGT CCGTCGTCGG CCTCGGCTGC 
AACAATTTCG GCCAGCGCAC CGATCCCGAC ACTTCGCGTC AGGTGATCCA CAAGGCGCTC
GATCTCGGCG TCACGCTGTT CGACACCGCA GACATCTATG CCGGCCAGGG CGGCTCCGAG
ACCGTGCTCG GCAACGTACT CGGCGACCGC CGCAAGGACA TCGTGCTGGC GACCAAATTC
GCCAAGCCGA TGAATGCCGA TGGCAGCAAG CGCGGCGCCT CGCGGCGTTA CATCATCGAC
GCGGTCGAGG CCAGCCTGAA GCGACTGCGG ACCGACTGGA TCGATCTGTA TCAGCAGCAC
GACTACGATC CGCTGACGCC GATCGACGAG ACGCTGCGCG CGCTCGACGA CCTGATCCGC
GCCGGCAAGG TGCGCTACAT CGGCAATTCC AACTTCCCGG CATGGCGGAT CGCCGAGGCC
GAATATGTCG CGCGCGCGCT CGGCGCACAC CGATTCGTGT CGTGCCAGGA CGAATACAGT
CTGGTGGTGC GCGACATCGA GAAGGACCTG CTGCCGGCGG CGCAGGAATA CAAGCTCGGC
CTGCTGCCGT TCTTCCCGCT GGCGAGCGGC TTGCTCACCG GCAAGTATCA GCGCGGCGCC
GAGATCGCGT CCAACACCCG CTTCGCCAAG ATGCCGGCGA TCCGCGACCG CTATTTCACC
GACCGCAACA TCGAGATCGT CGACCAACTG AAAGCCTTCG CGGACGCGCG CGGCCATTCG
CTGCTCGAAC TGGCGTTCTC CTGGCTCGCC GCGCGGCCGC AGGTGTCCAG CGTCATCGCC
GGCGCCACCA CGCCGGAGCA GATCGCGCAG AACGTCGACG CGGTCGGCTG GCAGCTCACC
ACCGACGAGA TGGCGGACAT CGACACCATC ACGCTGGGGT AA
 
Protein sequence
MQFRNLGGSG LRVSVVGLGC NNFGQRTDPD TSRQVIHKAL DLGVTLFDTA DIYAGQGGSE 
TVLGNVLGDR RKDIVLATKF AKPMNADGSK RGASRRYIID AVEASLKRLR TDWIDLYQQH
DYDPLTPIDE TLRALDDLIR AGKVRYIGNS NFPAWRIAEA EYVARALGAH RFVSCQDEYS
LVVRDIEKDL LPAAQEYKLG LLPFFPLASG LLTGKYQRGA EIASNTRFAK MPAIRDRYFT
DRNIEIVDQL KAFADARGHS LLELAFSWLA ARPQVSSVIA GATTPEQIAQ NVDAVGWQLT
TDEMADIDTI TLG