Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3893 |
Symbol | |
ID | 4024409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4329311 |
End bp | 4330936 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637964097 |
Product | hypothetical protein |
Protein accession | YP_571015 |
Protein GI | 91978356 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0724599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT ACTATCCGCT GATTGCGCGC GCCATATCCG GCCTGGACCC CAGTGCTCCG GGAGAGCAGC GCCGTGCGAT CTACGAGCGG GCCCGCGCGG CCTTGATCGC GCAACTGCGC GGCGTCCAGC CGCCGCTGAC CGAATCCGAG ATCACCCGCG AGCGGCTGGC GCTCGAAGAG GCGGTGCGCA AGGTCGAGTC CGAGGCCGCG CAACGTTCCC GCGACGCCTC CCGCGCCGAG CTGAAGAATC GCCGGCCCGC CGGCGAGGCC GCGCGTCCGG GCGACGCGCT GCGGGCGTCG AGCCGCGCGC CGTCGCGCCC GGGCGATCCG CCGCCGCAGG TCAGCCGCGC GCCGTTGCCG CCCGGCGCGG CCCAGGCCGA ACCGGAGCCG CCGGTGCGCC CGCGGTCGCA GTCGCCGGCG CCGCCGCGTG AAGACCGGCC GCAACGCAAT CTTCGGGTCG ATCCGCCGCC GATCCCGCCG GAGCCCGGCC GCGAGCGTCC TGCGCCGCGC CGTCCGGATC AGGGCCAGAG TGCGGGCCAA GGTCCAGGCG CTGGCCAGGG CGCCAATCCG GCCGCCGACA ATGGGCTGCG CGGCTTCCGC GACGTCACCG CGGATCTCGA CGATATCGGC CGCGCGGCCG CGCAGGCCAA TCGCTCGGCG CGCAAGACCT ACGCCAATGT CGCGCCGTCG CCGGAGTTCG ACCGGCTCGA ACCGTCGATG GAGAACCGCA CCGATCCGGG CGCGCCGTAT TCCTATGACG AGTCGATCGA CGAGGCGTCG CGCTATGCGC CGCAGCCCGC CACCACGCGA CCTCGAATCG AGCCGGATCG CAAGGCTTCG CGCAAGCCGA CGCGCAAGCC GTCGCGCTTC CCGCTGCGCA GCGCGTTGGT GATCGGTCTT GTGCTGGTGC TGGTCGGCGC CGGCATCTTG TGGGGGCCGT CGCTGTGGTC GGCGATGCGC GGACTGATGA AGTCGCAGCC CTCGACCGAG ACCGCGACCA CCACCGCGCC GCCGGCCTCG ACCGAGCGGC CGAAGATCAC CGACCGCGTC GGCCAGCCTT CGTCGTCGGA AATGGTGGCC CCTGTCGCTC AGCGCGTTGT GCTGTACGAC GAGGATCCGT CCGATCCCAA GGGCAAGCAA TATGTCGGCA CGGTGGTATG GCGCACCGAG CAGATCAAGG GCGCCAGCGC CAAGGGCGGC GCCGACCTCG CGGTGCGCGC CGACATCGAG GTGCCCGAGC GCAAGTTCAA GATGACGATG TCATTCCGCC GCAACACCGA CACCTCGCTG CCGGCGAGCC ACACGGCAGA GCTGACGTTC ATCCTGCCGC AGGATTTCAC CGGCGGCGGC GTCGCCAACG TTCCCGGCAT CCTGATGAAG TCGAACGAGC AGGCGCGCGG AACGCCGCTG GCCGGCCTCG CGGTCAAGGT CACCGACGGC TTCTTCCTGG TGGGCCTGAG CAATGTCGAG GCCGACCGCG CGCGCAATTT GCAGCTCCTG AAGGAGCGCT CCTGGTTCGA CGTGCCGATC GTCTACACCA ACCAGCGCCG CGCCATCATT GCGATCGAAA AGGGTCCGCC GGGAGAGCGC GCCTTCTCCG AAGCGTTCGG CGCCTGGGGC GAGTAA
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Protein sequence | MADYYPLIAR AISGLDPSAP GEQRRAIYER ARAALIAQLR GVQPPLTESE ITRERLALEE AVRKVESEAA QRSRDASRAE LKNRRPAGEA ARPGDALRAS SRAPSRPGDP PPQVSRAPLP PGAAQAEPEP PVRPRSQSPA PPREDRPQRN LRVDPPPIPP EPGRERPAPR RPDQGQSAGQ GPGAGQGANP AADNGLRGFR DVTADLDDIG RAAAQANRSA RKTYANVAPS PEFDRLEPSM ENRTDPGAPY SYDESIDEAS RYAPQPATTR PRIEPDRKAS RKPTRKPSRF PLRSALVIGL VLVLVGAGIL WGPSLWSAMR GLMKSQPSTE TATTTAPPAS TERPKITDRV GQPSSSEMVA PVAQRVVLYD EDPSDPKGKQ YVGTVVWRTE QIKGASAKGG ADLAVRADIE VPERKFKMTM SFRRNTDTSL PASHTAELTF ILPQDFTGGG VANVPGILMK SNEQARGTPL AGLAVKVTDG FFLVGLSNVE ADRARNLQLL KERSWFDVPI VYTNQRRAII AIEKGPPGER AFSEAFGAWG E
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