| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3729 |
|---|
| Symbol | |
|---|
| ID | 4024245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4163219 |
|---|
| End bp | 4163881 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637963933 |
|---|
| Product | putative photosynthetic complex assembly protein |
|---|
| Protein accession | YP_570851 |
|---|
| Protein GI | 91978192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00156993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00368888 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG ACCCCAGCCA GTTTCGTGAG CTTCCGTCGC CCTTGCCGGA GGGAGAGCGC
GTTCTCTGGC AGGGGAAGCC GACCTACAAA GGTTTGGCCA TCAGGTCCTT CCACATGCGG
GCAGTCGCGA TCTATTTCGT GCTGCTGATC ATGTGGAAGG CCTGGTCGAA CTGGTCGAAC
GGCCAGTCGC CCGGGGAAGC GTTGGCGTCC GCGTCAACGC TCCTGATCCC GGCGATCGGC
GGTCTCGCGC TGTTAGCGCT TCTCACCTAT CTGTTCAGGC GGGCGAGCTG TTACACGATC
ACCAGCAAGC GCGTCCTGAT CCAGACCGGC GTGGCGCTGC CGGTCACCCT GAACATTCCG
CTCAGCAAGA TCGCCAATGC CGATCTGAGC CAGCGTAGCG ACGGCAGCGG CGATATTCCG
CTCCGGATCA TCGATAGTAA ACGCACCTCC TATGTCCTGC TGTGGCCGCA CATCCGGCCG
TGGCGCCTGC GCGAGCCCGA GCCGATGATG ACGTCGGTCC CCGACGTCGC CGTCGTCGCC
GCCAAGCTTA CCGAAGCGGT GAAGACTCAG CTCGATTCCT CCGCAGTGTC TCTCGTTCAA
ACGGCTACCA GCGGACCGAA ACAAGGCCCG TTGTCGAATT CGACGGCAAC CGCAGTAGCC
TGA
|
|---|
| Protein sequence | MTNDPSQFRE LPSPLPEGER VLWQGKPTYK GLAIRSFHMR AVAIYFVLLI MWKAWSNWSN
GQSPGEALAS ASTLLIPAIG GLALLALLTY LFRRASCYTI TSKRVLIQTG VALPVTLNIP
LSKIANADLS QRSDGSGDIP LRIIDSKRTS YVLLWPHIRP WRLREPEPMM TSVPDVAVVA
AKLTEAVKTQ LDSSAVSLVQ TATSGPKQGP LSNSTATAVA
|
|---|
| |