Gene RPD_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3675 
Symbol 
ID4024190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4101737 
End bp4102894 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID637963879 
Productchemotaxis-specific methylesterase 
Protein accessionYP_570798 
Protein GI91978139 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.338867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAG CATTGGCAGG TAATCCGGCC TCGACTTCGA CGCAGTATGA GCCTCTGCGC 
GTGATGATCG TCGACGACTC CGTCGTCATC CGCGGTTTGA TCTCGCGCTG GATCGAGGCG
GAGCCGGACA TGGTGGTCGC GGCCTCGCTA CGCACGGGGC TCGATGCCGT CAATCAGGTC
GAGCGCATCA AACCCGATGT CGCAGTGCTC GACATCGAGA TGCCCGAACT CGACGGCATT
TCGGCGTTGC CGAAGCTGCT CGCCAAGAAG CGCGATCTGA TCATCATCAT GGCTTCGACG
CTGACGCGCC GCAATGCGGA GATCAGCTTC AAGGCGCTGT CGCTCGGCGC CGCCGACTAC
ATTCCGAAGC CCGAATCGAC CCGCGAGGCG TCGGCCGCCG ATATCTTCAA GCACGATCTG
CTGCAGAAGA TCCGGCATCT CGGCGGCAAG GTTCGGCGCA AGGCGTCGGC CGCGAGCTCC
ACCGCTGCAC CCGCGCTTAT GCGCGAGCCG GCCGCGCCGG CGCACAGCGT CGCAAGTCAG
GCGGCGCTGG TGAAGCGCCC GTTCGGCGTG ACGGCGCCGC GCGTGCTGCT GATCGGCTCC
TCGACCGGCG GCCCGCAGGC GCTGATGTCG TTGGTGAGCG AGATCGGGTC GGTCATCGAC
CACTATCCGG TGCTGATCAC CCAGCATATG CCGCCGACCT TTACCACCAT TCTCGCCGAA
CATTTGATGC GCTCCGCACG GCGGCCTGCG CACGAAGGCG TCGATGGTGA AGTCGTCAAG
TCCGGTCAGA TCTATCTCGC GCCAGGCGGT CGCCATATGC GGGTGGTGCG GCAGGGCGGA
CAGGCCGTGA TCGCGCTCGA CGACGGCCCG CCGGTGAACT TCTGCAAGCC CGCGGTCGAC
CCTCTGTTCA ACTCGGCGAT CGATGTTTGG CAGAGCGGAA TTCTCGCCGT GGTGCTGACC
GGCATGGGCT CGGACGGCAT GCGCGGCGGC AAGGACATCG TCGCGGCCGG CGGCAGCGTG
ATCGCGCAGG ACGAAGCGAG CAGCGTGGTA TGGGGAATGC CCGGCGCCGC GGCGAATGCC
GGCATCTGCG CCGCGGTTTT GCCGCTCAAT CAGATCGGGC CGAAACTTGT GAGGTTGTTT
TCTGGAGATC GGTCGTGA
 
Protein sequence
MSVALAGNPA STSTQYEPLR VMIVDDSVVI RGLISRWIEA EPDMVVAASL RTGLDAVNQV 
ERIKPDVAVL DIEMPELDGI SALPKLLAKK RDLIIIMAST LTRRNAEISF KALSLGAADY
IPKPESTREA SAADIFKHDL LQKIRHLGGK VRRKASAASS TAAPALMREP AAPAHSVASQ
AALVKRPFGV TAPRVLLIGS STGGPQALMS LVSEIGSVID HYPVLITQHM PPTFTTILAE
HLMRSARRPA HEGVDGEVVK SGQIYLAPGG RHMRVVRQGG QAVIALDDGP PVNFCKPAVD
PLFNSAIDVW QSGILAVVLT GMGSDGMRGG KDIVAAGGSV IAQDEASSVV WGMPGAAANA
GICAAVLPLN QIGPKLVRLF SGDRS