10 homologs were found in PanDaTox collection
for query gene RPD_3634 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3634  hypothetical protein  100 
 
 
149 aa  304  3e-82  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.386824 
 
 
-
 
NC_011004  Rpal_3807  hypothetical protein  77.7 
 
 
149 aa  241  3.9999999999999997e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1133  hypothetical protein  79.73 
 
 
149 aa  237  4e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3319  hypothetical protein  73.65 
 
 
149 aa  224  3e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.822642  normal 
 
 
-
 
NC_009485  BBta_3431  hypothetical protein  74.15 
 
 
149 aa  207  3e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0009  hypothetical protein  63.51 
 
 
171 aa  201  2e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5371  hypothetical protein  39.18 
 
 
137 aa  76.3  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0267488 
 
 
-
 
NC_007778  RPB_3322  hypothetical protein  45.45 
 
 
99 aa  63.9  0.0000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.200606 
 
 
-
 
NC_007964  Nham_2357  hypothetical protein  40.3 
 
 
115 aa  52.4  0.000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0134717  n/a   
 
 
-
 
NC_011004  Rpal_2695  hypothetical protein  50.82 
 
 
161 aa  51.6  0.000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.257462  n/a   
 
 
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