Gene RPD_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0009 
Symbol 
ID4020463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp10961 
End bp11476 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID637960185 
Producthypothetical protein 
Protein accessionYP_567150 
Protein GI91974491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGTCCG GCTCCTACAT CTGGCGCCAT TTGCCGAGCG CCGCACAGCG CGCTTTGATG 
GCCACCATGG CCCCGAAACA TCACCCCACT CCGCTGTCCG GCGGCGACCG CAAGGCCCTT
CAGAAGGAGC TCGGAAAATC GCGGGCGATG ACGGGTATCC TGGCCCGCCA GGCGGAGGAA
GCACGCTCTG AAGGTGAGGC GCTGATCCGG AAGGCCGACA ACCTGGCCTG CCAAAGCTGG
AACGAACGGA TGTGGAGCGA CGGCGGACCG GCGCAGCCGT CGCCGACTAT CGGCCAGGCC
ATCAATGGCG GATATCCCTG GCTAGAGGTG CAGTGCTCCC GCTGCAAGAC GATCTCCAGC
GTCGACCTCT GCGAGATCAA GCGGCCCCCG GAAACCTTCG TCCATACGCT GGAGGAGGCG
CTGCGCTGCC GGAAGTGCAG CCGGTCGAAA TGGCGCCCGC GCGGCGTGCT GCACCAGTTG
GCGCCGAACC AGCGCCACAC GCCGCCGGAA ACCTGA
 
Protein sequence
MLSGSYIWRH LPSAAQRALM ATMAPKHHPT PLSGGDRKAL QKELGKSRAM TGILARQAEE 
ARSEGEALIR KADNLACQSW NERMWSDGGP AQPSPTIGQA INGGYPWLEV QCSRCKTISS
VDLCEIKRPP ETFVHTLEEA LRCRKCSRSK WRPRGVLHQL APNQRHTPPE T