Gene RPD_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3163 
Symboladk 
ID4023668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3514902 
End bp3515984 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID637963364 
Productadenylate kinase 
Protein accessionYP_570290 
Protein GI91977631 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0563] Adenylate kinase and related kinases 
TIGRFAM ID[TIGR01351] adenylate kinases 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.203317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.331525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA TCCTTCTCGG GCCGCCTGGA GCGGGCAAGG GGACGCAGGC GGCTCGTCTG 
GTTCAGCAGT ACGGCATCGT TCAGCTCTCG ACCGGTGACA TGCTGCGGGC CGCCGTCGCT
GCGGGAACGC CGGTCGGACT GAAGGCCAAG GACATCATGG CGAGCGGCGG CCTGGTGCCG
GACGAGGTCG TGATCGGAAT CATCTCGGAT CGAATCGAGC AGTCTGACGC AGCCAACGGC
TTCATCCTCG ACGGCTTTCC GCGCACCGTG CCGCAGGCCG AGGCGCTGGA TCGGCTGCTG
AAGGACAAGC GGATCGGCCT CGACGCAGTG GTCGAACTGC GCGTCAACGA GAGCGCGCTG
CTGGCCCGCG TCGAGACCCG CGTCGCCGAG ATGCGGGAAC GGGGCGAGGA GCCGCGCGCC
GACGACAACG CCGAGGCGCT GTCGAAGCGA CTCAGCGCCT ACCGTGCCCA GACCGAACCG
CTGGTCGAGT ATTATTCGGA GAAGCGCAAG CTTCTGACTG TCGACGGCAT GATGACGATC
GACGAGGTCA CCCGCGAGAT CGGCCGCATC CTCGGCGCGC TCGGCCAGGC CAACGACAAA
AAGGCCGCCA AGACCGCCGC CGCCAAGCGT TCGGTGAAGA AGAGCGTAAA GCAGCCGGCC
GGCAAGGCAT CAGCCAAAAA AGCATCGAAG GATAAGTCGG TTAGCGACAA GACTTCGAGC
AAGAAGGCAT CTGCGAGGAA GGCTGCCAAG AAGGCTTCGA CCAAGGCTCC GGCCAAGGCC
GTAACCGCCA AAAAGGCCGC CAAGAAGGCC GCAGCCGGTG TGAAGAAGGC GGCGAAAGTG
ACTAAAAAGA CTGCTAAAAA GCCCGCTAAG GCGCCGGCCA AAAAGGCGAC TGGCAAGAAG
GTTGCTGGAA AGGCTCCGGC CAAGGCCAAA TCTCAGGCCA AGGTTGATTT GAAGGCCAAG
TCCAACGCGA AGGCCAAGGC TGAGACCCCG AAGGGCGGGG CCAAGGCCGG AAGCAAGTCA
GGCAAGAAGG CGTCCGGGGC CGTCGCGAAG AAGGCGAAGA AGGTCACGAA AAAGCGCGCT
TGA
 
Protein sequence
MRLILLGPPG AGKGTQAARL VQQYGIVQLS TGDMLRAAVA AGTPVGLKAK DIMASGGLVP 
DEVVIGIISD RIEQSDAANG FILDGFPRTV PQAEALDRLL KDKRIGLDAV VELRVNESAL
LARVETRVAE MRERGEEPRA DDNAEALSKR LSAYRAQTEP LVEYYSEKRK LLTVDGMMTI
DEVTREIGRI LGALGQANDK KAAKTAAAKR SVKKSVKQPA GKASAKKASK DKSVSDKTSS
KKASARKAAK KASTKAPAKA VTAKKAAKKA AAGVKKAAKV TKKTAKKPAK APAKKATGKK
VAGKAPAKAK SQAKVDLKAK SNAKAKAETP KGGAKAGSKS GKKASGAVAK KAKKVTKKRA