Gene RPD_3153 details

Gene Information

• Locus tag: RPD_3153
• ID: 4023658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: -
• Start bp: 3505489
• End bp: 3506244
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637963354
• Product: tetratricopeptide TPR_2
• Protein accession: YP_570280
• Protein GI: 91977621

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.294486
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGACGCT TCTCCACGAC ACCGAACGAC GCGCCGGCCA CGCGCCGATC TCAGCGGCTC 
GCCTCGATCG CGGCAATCGC CTTCGTTGCA GCGGCATTGC TGATCGCCGC GCCGCCCGCG 
CGCGCCGACG CTGTCGAGGT CGCGCCGGGC GTGCAGGTGA CGCGCAAGAC CTATTCGGCG 
CCGGTCAATC AGCAGCCGTT CTTCGGCTTT GCCGCCAAGA CGCCCGAGCA GCGCGCCGCC 
GACGAGAAAT TCGTCAGCGC TCTCGTCGCG GCGACCGGCT CGCGGCAGAA GGCGTTCGAG 
GAGACCAGCC TGCGCGGTTG GCGCGCGATC AGCAAGGGCA ATGCCTCCGA AGCCGCGCTC 
CGCTTCAACC AGGCCTATCT GCTGGCGCCG GACGAGAGCG CCGTCTATCA CGGCTTCGCA 
ATCGTCGCGA TGATGCGCTT CAACGACATC GACTACGCCG ATGAATTGTT CAAACGCGCG 
CGCAAGCAGC CGCATCCGCT GAAGCCGCTG CTGGCCGATC ACGGCCGCGC GCTGCTGATC 
GCCAAGCGCC CGCAGGAGGC GCGCGCGGTG CTGGAGCAGG CGATCGCGGA TACGCCCGAT 
CTCGCCGACG CCTGGTCGAA TCTCGGCTTC GCGCGGTTGC AGGCCGGCGA TGCCGCCGCC 
GCCTGCGCCG CGGCCGATGA GGCCGCCAAG CGCAAGCCCT CCAGCAACGT CGCCAGCGAT 
CTCGCGCTGC TGCGCAACAC CGCGCAATGC AAGTAA 

 

Protein sequence

MRRFSTTPND APATRRSQRL ASIAAIAFVA AALLIAAPPA RADAVEVAPG VQVTRKTYSA 
PVNQQPFFGF AAKTPEQRAA DEKFVSALVA ATGSRQKAFE ETSLRGWRAI SKGNASEAAL 
RFNQAYLLAP DESAVYHGFA IVAMMRFNDI DYADELFKRA RKQPHPLKPL LADHGRALLI 
AKRPQEARAV LEQAIADTPD LADAWSNLGF ARLQAGDAAA ACAAADEAAK RKPSSNVASD 
LALLRNTAQC K