Gene RPD_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3152 
Symbol 
ID4023657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3504630 
End bp3505454 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID637963353 
Productmetallophosphoesterase 
Protein accessionYP_570279 
Protein GI91977620 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.495281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.758441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG TCGTTCTCAC CGACACTCAT TTCGTCGCGG CCGGACGCCG CATCTACGGG 
CTCGATCCCG CCGAACGGCT GCGCGCGGCG ATCGCCTGCA TCAACCGTGA CCACCCCGAG
ATCGCGCTGG TGATCGTCAC CGGCGATCTC GCGCATTGGG GCGAGGACGC CGCCTATGAG
GCGCTCGCCG CCGTGCTCGG CGAATTGCGC GCGCCGAGCT TGCTGCTGAT GGGCAATCAC
GACAACCGTG ACGGTTTTTC GCGTTACTTC CCCGGCGTCG CGCGCGACGC CGGCGGCTTC
TTCCAGACCA TGCAGGTGTT CGACGCCGCC ACCATCGTGA CGCTCGACAC GCTCAACGAA
GCCGCACCCA ATCACGAGGG GCTGCTGTGC GACGCCCGGC TGGATTTCCT CGCGCACGCG
CTGAGTTCGG CGCCGACCGA CCGGCCGCTG CTGCTGTTCC AGCATCACCC GCCGTTCGAC
ACCGGGCTGC GCTACATGGA CACGATCCGG CTCGCCAATC CGGAGGCCGA ATGGGACGTG
ATCGCCCGGA CGCGGCGGCC CGACTATTTG TTCATGGGCC ATCTGCACCG GCCGATCGCC
GGCGGCTGGC GCGGCATCCC GTTCCACATC CAGCGCGCGC TGGCGCATCA GGTCGCGTTC
GATCTGGTCG CCGAGGGCCA TATCCCCGGC TCGCACGAAG CGCCGGACTA TTCGCATGTC
AGCGTCGAGG CGGACCGCAT CGTGATCCAC CAACGCTCGT TCCTGTACGA CGGTCCGCTG
TTCTCGCTGC ACGACAAGGA CGCACTCGAC CGCGCGGCGT TCTGA
 
Protein sequence
MKFVVLTDTH FVAAGRRIYG LDPAERLRAA IACINRDHPE IALVIVTGDL AHWGEDAAYE 
ALAAVLGELR APSLLLMGNH DNRDGFSRYF PGVARDAGGF FQTMQVFDAA TIVTLDTLNE
AAPNHEGLLC DARLDFLAHA LSSAPTDRPL LLFQHHPPFD TGLRYMDTIR LANPEAEWDV
IARTRRPDYL FMGHLHRPIA GGWRGIPFHI QRALAHQVAF DLVAEGHIPG SHEAPDYSHV
SVEADRIVIH QRSFLYDGPL FSLHDKDALD RAAF