Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2724 |
Symbol | |
ID | 4023222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3042136 |
End bp | 3043629 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637962923 |
Product | bacteriophage N4 adsorption protein B |
Protein accession | YP_569854 |
Protein GI | 91977195 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.193834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGTC TCACTACCAG CATTGTCGCC TTCCGCGATG TCGTCGAGAT CATGCTCGTC GTCACGGCGG TCCTCGTCGC GCTGTCGAGC ATCGACGATC TCGTCGTCGA CCTGCTGTAT TGGGGCCGGC GCCTGACTCG GCCCAATGCG TTCGATGCCA CGGCGGATCT CGCAACCATG GAGGCGATCC CACAGGCGCC GATCGCCGTG ATCATCCCGG CCTGGCAGGA GCATGAGGTC ATCTTCTCGA TGCTGGCGGC CAACCAGGCG ACGACGAAAT ACGAGAACTA TCATTTGTTC GTCGGCGCCT ATCAGAACGA TGCGGCAACG CTAACGGAAG TCCGCCGCGC GGAGGCGCAG TCGAATCGCG TGCATCTGGT CGTGGTGCCG CGCGACGGGC CGACCAGCAA GGCGGATTGC CTGAACGTGG TCGCTAACGG CGTGTTCGCG TTCGAGCAGG CCAAGGGGAT ACAATTTGCC GGCCTCGTGC TGCACGACGC CGAGGACCTG ATCCATCCTT ACGAGTTGGT CTTGTTCAAC TTCATGGCCC ATGACAACGA CTTCATTCAG TTGCCGGTGT TTTCGTTCAA GCGGCCGCTG CGTGAACTGG TCGGCGGCGT CTACATGGAC GAGTTCGCGG AATCGCACCT CAAGGACATT CCGGTTCGGC GAATGATCAG CGGTCTGGTG CCCTGCGCCG GAGTTGCAGC GTTCTTCGGC CGCGATATCG CGCTGCGGAC GATGGCCGAC AATGCCGGCA GCCTGTTCAG GAGCGACAGC CTGACCGAGG ACTATGATTT CGCCTTGCGG CTCGGCCTGC TCGGGGCGCG GGTCAACTTC GTCATCGCGC CTGCATCCTA TACGATCGAT ATTTCGAGCA GCACAGATCT CCCCGAGATC GTCGGTCGAA AGCTGCCGAT CGCAACCCGC GAGTTTTTTC CGAACAGCTT CGTGGCGGCC CAGCGTCAGC GTGCGCGCTG GCTGATGGGA ATCGTTTTCC AGGGGACGCG GTCGTTCGGC TGGCGCGGGA CGACGGGAAT CAAGTACGCG CTCCTTCGCG ACCGGAAGAG CATCCTGACC GCGCCGCTGA TCATGCTGGC GTATCTGGTG CTGTTTGGCC TGGTTTCGGT GAACCTGTAC TTCCGGTGGT ATCTGCCTGA TGAGGTGAAT CAATTTCCCC TTCTGCAAGA ACCGCTGGTG CAGCAATTGC TGTGGTTGAA TTTCGCGTTT TTGATCTGGC GTCTGCTACA CAGGTTTTAT TTTACCAACC GGATTTATGG ACTGCGTCAC GGTTTAATGT CGATCCCGCG GCTACCGCTG GGCAATTTCC TCAACTTTTT TGCCGTTGCG CGTGCTTGCC GGCTGTATTT ATCCCATAGT TTGTTGGGCA CGCGGCTGGT TTGGGATAAA ACCGAACATC AATATCCGAC CGGATTGCAC GCCTTCGATT TGGGGCCCGG AACGAAGCTG CGGGAAGCCG ACAGCGCCAA ATAG
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Protein sequence | MGSLTTSIVA FRDVVEIMLV VTAVLVALSS IDDLVVDLLY WGRRLTRPNA FDATADLATM EAIPQAPIAV IIPAWQEHEV IFSMLAANQA TTKYENYHLF VGAYQNDAAT LTEVRRAEAQ SNRVHLVVVP RDGPTSKADC LNVVANGVFA FEQAKGIQFA GLVLHDAEDL IHPYELVLFN FMAHDNDFIQ LPVFSFKRPL RELVGGVYMD EFAESHLKDI PVRRMISGLV PCAGVAAFFG RDIALRTMAD NAGSLFRSDS LTEDYDFALR LGLLGARVNF VIAPASYTID ISSSTDLPEI VGRKLPIATR EFFPNSFVAA QRQRARWLMG IVFQGTRSFG WRGTTGIKYA LLRDRKSILT APLIMLAYLV LFGLVSVNLY FRWYLPDEVN QFPLLQEPLV QQLLWLNFAF LIWRLLHRFY FTNRIYGLRH GLMSIPRLPL GNFLNFFAVA RACRLYLSHS LLGTRLVWDK TEHQYPTGLH AFDLGPGTKL READSAK
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