Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2699 |
Symbol | |
ID | 4023197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3016488 |
End bp | 3017534 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962898 |
Product | polysaccharide deacetylase |
Protein accession | YP_569829 |
Protein GI | 91977170 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.222109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCATCGC GTGGTTGGTG GGCGGCGGCC GGGCTGGAGT TGGCCTATTT CAGCGGGCTC GCACGGCTCG CGCAATTCGG CAGCGGCGGC GCCGGCGTCA TCCTGCGGTT CGAGCGCGTG CGCCCGACGC GCAAGGACAG GTTTCAGCCG CTGCGCAGCC GCGAGATCAC GCCGCAATTC CTGGATCGCC TGCTACGCGC CCTGCGACGC TGGGATTGCG CCGTCGTTTC GCAGGACGAA GTCCTCGATC GCATCGCGCG CCCGGACACC CCGGGCCGCT TCGTCTGCCT CACGTTCGAC GGCGGGTCCC GCGACCTGAT CAGCTATGGT CATCCTGTGC TGGCTCGGCA CAGCGTGCCT TTCACCGTCT ATCTGCCGAC GGCTTTTCCC GACGGTCTGG GCGAAGCATG GTGGCTCGCG CTGGAGCAGG TGATCGCCGG CAACGATCGC ATTGCTCTGA TGATCGACAA CAGCGAGCGG CGGTTCGACA CCGCGAGCAC CGACGACAAG TACCGCGTTT TCCACTTCCT CGGCACCTGG CTGTGTGCGC TGACGCCGCC TGATCTCGCC GCGGCGATCC GCGATCTCTG CGCCCGCTAC GGCGTCGACA TCGCAGGACT GACGAGCGAA GCGGTGATGA ATTGGGAGGA GGTGGCCAGG CTCGCCGCCG ATCCGCACGT CACGATCGGA AGCGCCACGG TGAACTACCC GCTGCTCGCC AATGCGAGCG ACGTGGTCGC GCATCGCGAA ATCGCGATGG GCCGCGCCGT GCTGTGCGCA GCGCTCGGCC GCGACGCTGC GCATTTCGCC TATCCGTATG GCGAGCGCGG CAGCTTCACG CCGCGCGACG TGAAGATCGT CGAGGAGGCG GGCTTTGCCA GCGCGGTGAC CGCCATCCCC GGCGTGATCC ATCGACGCTC GCCGTCGCAG CCTTGGATGC TGCCGCGGAT CGCATGGGAC GGCCGCCGCC GCTCGCTGCG CGGGCTGCGG GTGGTTTTGT CGGGATTGAT GCCGGGCGCG GCGGCTCAGC TCGGCCGGCG CTATTGA
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Protein sequence | MSSRGWWAAA GLELAYFSGL ARLAQFGSGG AGVILRFERV RPTRKDRFQP LRSREITPQF LDRLLRALRR WDCAVVSQDE VLDRIARPDT PGRFVCLTFD GGSRDLISYG HPVLARHSVP FTVYLPTAFP DGLGEAWWLA LEQVIAGNDR IALMIDNSER RFDTASTDDK YRVFHFLGTW LCALTPPDLA AAIRDLCARY GVDIAGLTSE AVMNWEEVAR LAADPHVTIG SATVNYPLLA NASDVVAHRE IAMGRAVLCA ALGRDAAHFA YPYGERGSFT PRDVKIVEEA GFASAVTAIP GVIHRRSPSQ PWMLPRIAWD GRRRSLRGLR VVLSGLMPGA AAQLGRRY
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