| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2499 |
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| Symbol | |
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| ID | 4022990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2793058 |
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| End bp | 2794959 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637962692 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_569630 |
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| Protein GI | 91976971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.408241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.222109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAT CGGCGCTGCC GGTTTGCCCT GCGCCGACTT CATGCTTATC TGCTCAGACC
ATGACGTTGC CCGCATCCGC ATTGCCGCCC GAACCGGTGT CGGCGTTTCT CGGCGTGACC
CGTTCCGCCA CCGGCAAGCT GTGGCGCGAT CGGCTCGATC CGCGCGGCAC GGCGAAGGCG
CAGGCGATCG CGCAACGCTA TCAATTGCCG GAGATGCTGG CGCGGGTGAT CGCCGGCCGC
GGCGTCGAGA TCGACGCGGT CCCGGATTTC CTCGATCCGA CCATTCGCAA GCTGATGCCC
GATCCGTCGT CGGTGACGCA GATGGAGGCG GGCGCGCAGC GCATCGCCGA CGCCGCGATG
AAGCGCGAGA CGGTGGCGAT CTTCGGCGAC TACGACGTCG ACGGCGCGAC CTCGGCGGCG
CTGCTCACCT GGCACCTGCG GCATTGCGGG CTCGATCCGC TGATCCACAT TCCCGACCGC
ATCTTCGAAG GCTATGGCCC CAATGTCGAC GCCATCCGCG GGCTGTCGGA GAAGGGCGCG
ACGCTGCTGA TCACGGTCGA TTGCGGCACC ACCAGCCTCG AGCCTTTGGC CGAGGCGCGC
AGGCTCGGCA TGTCGGTGGT GGTGATCGAT CATCACCAAT GCGGCGATGA ACTGCCCGAG
GTCGAGGCGC TGATCAATCC GAACCGGCCC GACGATCTGT CCGGCCTCGG CCATCTCGCC
GCTGTCGGGC TGGTGATGAT GACGCTGGTC GCGGTCAATC GCGAGCTGCG CCATCGCGGC
TTCTGGACCG TCGAACTACC GGAGCCCAAT CTGCTCGACA TGCTGCATCA CGTCGCGCTC
GGCACCGTCG CCGACGTCGC GCCGCTGATC GGGCTCAACC GCGCTTTCGT CGCCAAGGGA
CTGATCGCGC TGCGCCGGCG CGACCATGTC GGCCACACCG CGCTGATGGA CGTGGCGCGG
CTCAACGGGC CGCCGGACGT GTTTCATCTC GGCTTCATGC TCGGGCCGCG GATCAATGCC
GGCGGGCGGA TCGGCCGCGC CGATCTCGGG GTGCGGCTAT TGCTCGAAGG CGACGTCTCG
GAGGCGGCGC GGATCGCCGC CGAACTCGAT CGCCTCAATA CCGAGCGGCG CGTGATCGAG
CAGATGGCGG AAGCGCAGGC CGAAGCCGAG GCGATGGCCT CGCTGGGGCT GGAAGACAAG
GGCGCGGTGA TCGTCACCGC CTCCGAGGGC TGGCATCCCG GCGTGGTCGG GCTGGTGGCG
TCGCGACTGA AGGAGAAGTT CGGCCGGCCG GCCTTCGCGA TCGCGCTCGA GCCCGGCGGC
ATCGGCACCG GTTCGGGCCG ATCGATCGGT GGCGTCGATC TCGGCCGTGC GGTGCGCCGC
GCGGTGAGCG AAGGCCTGCT GATGAAAGGC GGCGGCCACG CGATGGCCGC GGGCGTGACG
CTGCGCAAGG AGCGGCTCGC CGAATTCCGC GGCTGGCTCG AAACCGCGCT CGCCGCCGAC
GTCGCGAAAT CCCGCCATAT CAACGAGCTG TTGATCGACG GCGCGGTGTC GGCGCGCGGG
GTGACGACGG AGTTCGCGGC GACGCTCAAT CGCGCCGGCC CGTTCGGCGC CGGCAATCCG
GAGCCGGTGA TCGCGCTGCC GGCGCATCAG CTGATCTATG CCGACGAGGT CGGGCAGGCG
CATCTGCGGC TGCGCTTCAA ATCCGGCGAC GGCGCCATCG TCAACGGCAT CGCGTTCCGC
AGCGTCGGCC AGAAGCTCGG GCAGGCGCTC ACGGAAAATC GTGGCCAGTC GCTGCACGTC
GCGGGCTCGC TTTCGATCGA CCGCTGGCAG GGCGCCGAGC GCGTCCAGCT ACGCGTGATC
GACGTCGCGG TGCCTGATCC CGGACCTGCG ATGATCAGGT GA
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| Protein sequence | MCGSALPVCP APTSCLSAQT MTLPASALPP EPVSAFLGVT RSATGKLWRD RLDPRGTAKA
QAIAQRYQLP EMLARVIAGR GVEIDAVPDF LDPTIRKLMP DPSSVTQMEA GAQRIADAAM
KRETVAIFGD YDVDGATSAA LLTWHLRHCG LDPLIHIPDR IFEGYGPNVD AIRGLSEKGA
TLLITVDCGT TSLEPLAEAR RLGMSVVVID HHQCGDELPE VEALINPNRP DDLSGLGHLA
AVGLVMMTLV AVNRELRHRG FWTVELPEPN LLDMLHHVAL GTVADVAPLI GLNRAFVAKG
LIALRRRDHV GHTALMDVAR LNGPPDVFHL GFMLGPRINA GGRIGRADLG VRLLLEGDVS
EAARIAAELD RLNTERRVIE QMAEAQAEAE AMASLGLEDK GAVIVTASEG WHPGVVGLVA
SRLKEKFGRP AFAIALEPGG IGTGSGRSIG GVDLGRAVRR AVSEGLLMKG GGHAMAAGVT
LRKERLAEFR GWLETALAAD VAKSRHINEL LIDGAVSARG VTTEFAATLN RAGPFGAGNP
EPVIALPAHQ LIYADEVGQA HLRLRFKSGD GAIVNGIAFR SVGQKLGQAL TENRGQSLHV
AGSLSIDRWQ GAERVQLRVI DVAVPDPGPA MIR
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