| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2288 |
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| Symbol | |
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| ID | 4022773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2550900 |
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| End bp | 2552528 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637962480 |
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| Product | hypothetical protein |
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| Protein accession | YP_569421 |
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| Protein GI | 91976762 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0724599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.553437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGA GGGGAGTATC GAGAGCTGCG CCGACTGAAG TGGACGCGCG ACCTGAGCGG
AGCTTTACGC GAGTAACCGC CTTTGTTGTC GCGATCGAGA ACTATCGAAA ACCGCCCAAG
GGCGAGCCGT TGCCATCAGT CGATTTCGCA CATGCTGACG GGGACGCCTT CGCTGACGTT
ATCAAGAGAA TCTATGCCGA TCTACCGGAC GAGGACGTGT CGGTGCATGT CCTCAAGGAC
GCAGATGCCA GTCTGACGGC TTTGCGAGAC GATCTGAAGT ACACGATCAA GACCCTCGCC
GATGATGAGC TCTTCATCTT CTACTATGCT GGACATGGGT TTCATGGTGC TGGCGGCAAC
CGCCTCAGTA CCTACGATAC CAACCGCCAC ACCGTCGAGG ATACGTCGCT GTCGATGCGC
GACGATCTTC TGGAACCGCT GATGGATAGC GAGTGCCGTC AGGCGCTGGT GTTTGTCGAT
GCGTGCGCAG AGAGATTCAG CGGTGTCGTC AAATCGCGCG ATGTTATCAC CAATCTTGAC
GCTGATGAGG TCAGGGAGTT TCTCGACAGC GGGTGGTACC TCGGCGTTTT CTTGTCCTGC
TCGCCGGGCG AAAAGTCATA TCCTTCGGCA ACGCTAAAAC ATGGGATTTG GACGCACTTC
CTGCTTGAAG CGATGGAAGG TCGGGCGCCG AAAGCCTTGA CGCGCGATCG CTGGCTGACC
GACTTCGGAT TGCGCGATTA TCTTCAAAGG GAAGTTCCGG GGTTCGTCAC GCGCCAGATG
CAGGTGCGAG GTACTCAAAC GCCTCAAGCG ATTCTCTCGG GAAGCAACAG CTTCCAGATT
CGCCACATTC CGAAACCGCC CACCGTGCCG GCCGACGCGG CGTTGGCGGG CATCTCACTG
CGCAACAACA GCGAGTTTCT GGAAGGCACG GAAACGGGAG AGATCCGAAG GCTTCCCGGG
TTTACGCGAA CCAAAAAGCA CACCGTGCCG ACCGAAGTAA ACGACTCAGC GGAATCGTGG
TGCCAGCGTC TGCTCACCGA GCGCGTCGCC GAAGAGTTAC AGGAGCTCTA CGAGTCCGCG
CGCAAGGCGC TCAACGCACG GCGGAAGGAC GTCCAGAAGG CGGAAGATAG CGGCGGCGGT
GACCTGGATA CGGCGGCATT CCGTTATTCG ATCGAGACGG GCCAGAACCC TGACGACCCC
GCAGAGTATA TTATCCGGCG TCGACTGGAG CTGCGCGATG GCTGGGACGC GCATCGCGCC
GCGATCGACG AAATATTCGG CAATGAGTTC GATCGCTTGG TAATAGAGTT CGAGCGGATG
GACGACACGT TCGACGCATT GGTTGAAAAG CTTGAAGACA TCCAGGAAAG CCAAGGTGGT
GAGGTCCACG ACGACGATCG GACCAAACGA GCGACGTACG ACAGAGACGG CGTGACGTTT
ACTTTCGATC TGACGAAGCG ACGTCTAGAA ATTTCGTTTG GTCGATCGGG GACACTCGAA
CTCGTCGATG CTGCGCAGAA ATTCCAACTG GGCACGAGCC GAGCAAGCCC AATGCTGGCG
GCGCCGACCA GGCAATCCGC GTCTTCAATT TCAACTGCGC CCGGTCGCCG TGATGCCCGA
GGTCGGTAA
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| Protein sequence | MPKRGVSRAA PTEVDARPER SFTRVTAFVV AIENYRKPPK GEPLPSVDFA HADGDAFADV
IKRIYADLPD EDVSVHVLKD ADASLTALRD DLKYTIKTLA DDELFIFYYA GHGFHGAGGN
RLSTYDTNRH TVEDTSLSMR DDLLEPLMDS ECRQALVFVD ACAERFSGVV KSRDVITNLD
ADEVREFLDS GWYLGVFLSC SPGEKSYPSA TLKHGIWTHF LLEAMEGRAP KALTRDRWLT
DFGLRDYLQR EVPGFVTRQM QVRGTQTPQA ILSGSNSFQI RHIPKPPTVP ADAALAGISL
RNNSEFLEGT ETGEIRRLPG FTRTKKHTVP TEVNDSAESW CQRLLTERVA EELQELYESA
RKALNARRKD VQKAEDSGGG DLDTAAFRYS IETGQNPDDP AEYIIRRRLE LRDGWDAHRA
AIDEIFGNEF DRLVIEFERM DDTFDALVEK LEDIQESQGG EVHDDDRTKR ATYDRDGVTF
TFDLTKRRLE ISFGRSGTLE LVDAAQKFQL GTSRASPMLA APTRQSASSI STAPGRRDAR
GR
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