Gene RPD_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2197 
Symbol 
ID4022682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2456796 
End bp2457110 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content65% 
IMG OID637962392 
Productcytochrome c, class I 
Protein accessionYP_569333 
Protein GI91976674 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCT TGACTTTCGG GCTTCCGTTG CTGCTGCTCG CCGGCGTTTG CACTCCATCG 
TTCGCGGCTG ACGCCGACAA CGGCGAAACG CTGGCCAAGC GCTGGTGCAC CAGCTGCCAC
GTGGTTTCGG ACGAGCAGCG CAAGGGCTCA GACCTCGCAC CGTCTTTCGC CTCGATCGCG
TCCCGGCCGG GTTTCGATGA GCATACGCTC GCCACCTTCC TGCTCGAACC GCATCCGAAA
ATGTCCGGGA TGGCGCTGAG CCGCACCGAG ACCAAGAACC TCGCCGCCTA TATCGCCGAG
CAGAAGCGGC CGTGA
 
Protein sequence
MRALTFGLPL LLLAGVCTPS FAADADNGET LAKRWCTSCH VVSDEQRKGS DLAPSFASIA 
SRPGFDEHTL ATFLLEPHPK MSGMALSRTE TKNLAAYIAE QKRP