| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1838 |
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| Symbol | |
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| ID | 4022320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2056439 |
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| End bp | 2057872 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962032 |
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| Product | amidase |
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| Protein accession | YP_568975 |
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| Protein GI | 91976316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.942234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAC ATCAGGAGCT GATTCAGGCG ACGGCTTGCG CGATCGTCGA CAGGCTCGAG
TCCGGCGACG TCACGCCGCT CGACCTGCTC GACGCGTTGG AGCAGCGCAT CGCCGAAGTC
GACGGCGCCG TCAACGCGCT GCCGACGCTG TGCTTCGATC GCGCCCGCGA ACGTGCCGCC
GCCTTGATGA AAAAACCGAA AGCGCAGCGC GGTCTGCTGG CCGGCCTGCC CGTCCCGATC
AAGGACCTCA CCGCTGTCGA AGGCGTGCTG ACCACGCAAG GCTCGCCGAT CTACAAAGAC
CATGTGCCGG ACCGCTCCGA CCTCATGGTC GAACAGCTCG AAGCCAATGG CGGCGTGGTC
TATGCGAAAT CCAACACGCC GGAGTTCGGC GCAGGCGCCA ACACCTTCAA CGAGGTGTTC
GGGGCGACGC GCAATCCGTG GGACCTGTCC CGCTCGGCCG CAGGATCGTC CGGCGGCGCT
GCGGTTGCGC TCGCGACCGG CACCGCATGG CTCGCGCACG GCTCCGACAT GGGCGGCTCG
TTGCGCAACC CCGCGAGCTT CTGCGGCGTG GTCGGACTGC GCCCGAGCTT CGGCCGGGTC
GCGCATACGC CGACGGCGAA GATCGATCGC AATCTCGGCG TGCAGGGTCC GATGGCGCGC
AATGTCGAGG ATGTCGCGCT GCTGCTCGAC GCGATGAGCG GCGAGCACGC CGCAGATCCG
CTGTCGCTGC CCTCGCCGGC GACATCGTTT CTCGCCGCCG CGCGCGCGCG CACCAAGCCG
CTGCGCGTGG CCTACTCGCC CGATCTCGGG ATCACACCGG TCGATCCGGA AGTCGCCGCG
ATCACCCGCA GGGCGGCCGA GCGCTTCATT GAAGCCGGAG TCACCGTCGA TGAGGCCCAG
CCTGATCTGC GCGAGGCACA TGATTGCTTC CAGGTGCTGC GCGCGTTCGA CTTCGCGATC
AGCAAGGCCG ATCTGCTGCG CACCCAGCGC GAGCTGCTGA AGCCGGAAGT GATCTGGAAC
ATCGAACAGG GGCTCAAGCT CAGCGTCGAC GAGCTGGCGA AGGCCGAAGC GCAGCGCGTG
GCGATGGCGG CGCGCACGAT CGAGTTCTTC AAGACCTACG ATCTGCTGCT GTGCCCCGCG
ACGATCACCG CGCCGTTTCC CATCGAGCAG CGTTACCTCG CCGAATGCAA CGGTAAGACA
TTCGACAACT ACGTCGAGTG GCTGGGCATC GTCTATGCGA TCACGCTGGT GTGCTGCCCC
GCGCTGTCGC TGCCCTGCGG CTTCACCGCG ACCGGTCTGC CGGTCGGGCT GCAGATCATC
GCGCGGCCGC GCAACGAATC CGGCCTGCTC GCCGGCGCAG CTGTGCTCGA GGACATTCTC
GGCCTGCGCG GCTCGACGCC GATCAATCCG CGGCCCGCGC CTGCAAGCCT CTGA
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| Protein sequence | MAAHQELIQA TACAIVDRLE SGDVTPLDLL DALEQRIAEV DGAVNALPTL CFDRARERAA
ALMKKPKAQR GLLAGLPVPI KDLTAVEGVL TTQGSPIYKD HVPDRSDLMV EQLEANGGVV
YAKSNTPEFG AGANTFNEVF GATRNPWDLS RSAAGSSGGA AVALATGTAW LAHGSDMGGS
LRNPASFCGV VGLRPSFGRV AHTPTAKIDR NLGVQGPMAR NVEDVALLLD AMSGEHAADP
LSLPSPATSF LAAARARTKP LRVAYSPDLG ITPVDPEVAA ITRRAAERFI EAGVTVDEAQ
PDLREAHDCF QVLRAFDFAI SKADLLRTQR ELLKPEVIWN IEQGLKLSVD ELAKAEAQRV
AMAARTIEFF KTYDLLLCPA TITAPFPIEQ RYLAECNGKT FDNYVEWLGI VYAITLVCCP
ALSLPCGFTA TGLPVGLQII ARPRNESGLL AGAAVLEDIL GLRGSTPINP RPAPASL
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