5 homologs were found in PanDaTox collection
for query gene RPD_1803 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_1803  hypothetical protein  100 
 
 
329 aa  671    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.23913  normal 
 
 
-
 
NC_007958  RPD_1804  hypothetical protein  70.89 
 
 
248 aa  100  3e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.80641  normal 
 
 
-
 
NC_010511  M446_0736  peptidase S8/S53 subtilisin kexin sedolisin  28.73 
 
 
975 aa  61.6  0.00000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0496  SH3 type 3 domain protein  44.12 
 
 
127 aa  55.5  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0224015  normal 
 
 
-
 
NC_011892  Mnod_8379  peptidase S8/S53 subtilisin kexin sedolisin  29.01 
 
 
241 aa  45.8  0.0009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
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