Gene Dfer_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0496 
Symbol 
ID8224063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp556627 
End bp557010 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content55% 
IMG OID644928374 
ProductSH3 type 3 domain protein 
Protein accessionYP_003084930 
Protein GI255034309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0224015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCC GGGGAACAAA AGAGGCGATC AGGAAAGGGA ACTACCAATT ACTGCAACGC 
GCGCCTGCCA CAACATTGTG CGGCTTGGGC GTCGATTTTA ATGAGGCCAA TCCGGTAGAT
CCCGATTTTG GTGCCTTCAC AATTGATGAC GACCCGGTAG ACGGCGCGTT GGAGCCGGTA
CTGCAAAACA GGTATATAGT AATCGCGCGG AATGGCTTAC GGCTAAGGGA AGGCCCCGGC
ACGCAGTTCG AGGTAATAGG GAGCATGAGG CCCGGACAGG TGATCTTTGC AACAATCACC
ATAGACGGCT GGGCACGGGT AGATGTGGAA GGGGACGGCC TGATCGACGG CTTTGCGTCC
GCAGATTTCC TGCAAAGGAC ATAA
 
Protein sequence
MGFRGTKEAI RKGNYQLLQR APATTLCGLG VDFNEANPVD PDFGAFTIDD DPVDGALEPV 
LQNRYIVIAR NGLRLREGPG TQFEVIGSMR PGQVIFATIT IDGWARVDVE GDGLIDGFAS
ADFLQRT