| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1578 |
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| Symbol | |
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| ID | 4022058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1771287 |
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| End bp | 1772588 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961773 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_568716 |
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| Protein GI | 91976057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.611653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.703431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TCGCCTCCCG CGTCGCGCCG CCGCGGCCGG CTTTGTCCGA CCGCCTCAAG
TTCTACGGGA TCTGGATCGC GACAGCGCTC ACGCTGCTGC TGTTGCCGAA GATCTTCGCA
TCCGGCGGAT CGCTGACCAC GTTCAGTCTG GTCGGGATCT CGATCATCTT CGCGCTGTCC
TACAATATCC TGCTGGGCCA GACCGGGATG CTGTCGTTCG GCCACGCGGT GTATTACGGG
CTCGGCGGCT TCCTCGCGAT CCACGCCATC AATCTGCTCG GCGGCAACAA ATGGCCGATC
CCGCTGCCGC TGGTCCCGCT GATCGGCGGC GTCGCCGGGT TGTTCTTTGC GGCCCTGATC
GGCTGGGTGA TGACGCAGCG ATCGGGCACC GCCTTTGCGA TGATCTCGCT CGGCCTCGCC
GAACTGGTCG CCTCCTCGGC GCTGATCCTG CGCACCTTCT TCGGCGGCGA GGCCGGCATC
TCGGCGAACC GGACCAAGCT GTTCAAGCTG TTTGGGCTGA ACTTCGGTCC GCAGATCCAG
ATCTATTATC TGGTCGCGGC CTGGACCCTG ATTGCGATCA TCGCGATGTA TGCGCTGACC
CGCACCCCGC TCGGACGAAT GTGCAACGCG GTCCGCGACA ATCCCGAGCG GGTGCAGTTC
GTCGGATACG ATCCACATGT CGTCCGCTAT CTGGCGTTCT GCTTCTCCGG CTTCTTCGCC
GGCATCGCCG GTGCGCTCGC TGCGATCAAT TTCGAGATCG CCAATTCCGC CTATCTCGGA
GCCGTGCAAT CCGGCACCGT GCTGTTCGCG GCCTATATCG GCGGCATCGG CTTCTTCATC
GGCCCGATCG TCGGCGCGAT CTTCGTGACC ATCCTGTCGC TTGGGCTCAG CGACCTCACC
CACGTTTGGC AGTTGTATTT CGGGCTGTTC TTCATCGCCG TGGTGATGTT CACGCCGGGC
GGCATCACCG GCCTGATGAT GATGCACCGG CCGCTGCTGC GCGCCGGCAT GCTGACGCAG
ATGCTGCCGA GCTATCTGCT GGCGGCGCTG CCGACGCTGG CGCTGGTCAC CGGCCTGATG
CTGATGATCG AAACCACCGT GCACTACACC GTCAATCCGG GCGAGAGTCC GCACATCAAG
GCGTTCGGCA TCCCGTTCAA CGCCGCGAGC CCGCTGACCT GGACCATCTC CGCGGTGCTG
ATCGTGGCCG GGTTCGTCCT GGCGCGGCTC GCCTGGGCGC GTGTCGGCCA CACCTGGGAC
ACCACGCTGA CCGCCGCCCG CGCCAAGGTT CACGCCCGAT GA
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| Protein sequence | MTDLASRVAP PRPALSDRLK FYGIWIATAL TLLLLPKIFA SGGSLTTFSL VGISIIFALS
YNILLGQTGM LSFGHAVYYG LGGFLAIHAI NLLGGNKWPI PLPLVPLIGG VAGLFFAALI
GWVMTQRSGT AFAMISLGLA ELVASSALIL RTFFGGEAGI SANRTKLFKL FGLNFGPQIQ
IYYLVAAWTL IAIIAMYALT RTPLGRMCNA VRDNPERVQF VGYDPHVVRY LAFCFSGFFA
GIAGALAAIN FEIANSAYLG AVQSGTVLFA AYIGGIGFFI GPIVGAIFVT ILSLGLSDLT
HVWQLYFGLF FIAVVMFTPG GITGLMMMHR PLLRAGMLTQ MLPSYLLAAL PTLALVTGLM
LMIETTVHYT VNPGESPHIK AFGIPFNAAS PLTWTISAVL IVAGFVLARL AWARVGHTWD
TTLTAARAKV HAR
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