| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1555 |
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| Symbol | |
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| ID | 4022035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1733369 |
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| End bp | 1734553 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961750 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_568693 |
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| Protein GI | 91976034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGGG ACGGTTCGCT CTGCGGCGCG ATGATGCCGA CCGACCAAAC CTCTCCATCA
AGGCCAAGGG CGATGAACAA GGCTCTCCTC TTCGGAAATA CGCTCATCAT CGTTATGGCG
CTTGGGCTTG CGCTTGCGGC CTGCGACCCC GCCAGCCCTA AAGCCGAGCG CAAGGACGCG
CCAACCCGCA TGACGGATCG CCCGGTGCTG GTCACAGCAG TCCGCTTCGA GGACGATACC
AGAACGCGCA ATTTCGCCGC GACGGTCCGC CCCAGCATCG AAAGCGACCT CGGCTTTCGC
GTCGCCGGCA AAGTCGCACG GCGGATGGTC CGAAATGGCG ACCTGGTGCG CAAGGGGCAA
GCCCTGCTGG TTCTCGATAC CAACGACCTC GAGCTGCAAC GCGAGCAGGC CCAAGCCGAG
GTGAGGGCCG CGACCACCAG TCTGGCGCAG GCCGAAGCCG ACGAAAAGCG CGTCACCGAG
CTGCAAAGTA AAGGCTGGGC GGCCGCGGCT ACTCTCGAAA AGGGCCGTGC TGCAGCCGAG
GAGGCCCGAA GCCGGCTGAC CCGAGCGCAG CGCTCGGTGG ACCTTGCCGC TCACGCGCTC
GACTACGCAA CCCTCGAAGC CGACGCCGAC GGCGTCATCA CCGCGACGCC GGTCGAGCCG
GGCCAAGTGG TCGCGCCCGG CCAGGTCGCT GTTCGCCTTG CGCGACTGAC CGAGATGGAA
GCGCTGGTGG CACTGCCGGA AACTTTCGTC GAGCAGGCAA AAAGCGCGAT CCCCAGCCTT
TCGCTCTGGT CGCTGCCGGA TCGAACCTAC CGGGTGCGAT TGCGCGAACT GGCGCTCGCG
GCCGACCCGG CGACCCGCAC CTATGCTGCC CGCTACAGTA TCCTGGATGT CGACCAGGCC
GTGCGGCTCG GTATGAGCGC GACGTTGACA CTGAGCGAGT CGATCGGAGT GCGTGCGGCG
CGATTGCCGC TCACTGCGCT GTTCAATCAC GGCCAGGGTC CGTCGGTCTG GGTTGTCGAT
CAGGACGGCA AGTTGACGCC GCGCCGGGTG ACGACCGCCC GCTATGACGA CCGCAGCGTG
CTGATCACGG CGGGGGTTTC CGAAGGCGAG ACGGTGGTGC AGCTCGGGGT CGAAAAGCTC
GACCCTGGTC TGACTGTCCG TCCGATCTCC GCGCTTGCCT TTTGA
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| Protein sequence | MRRDGSLCGA MMPTDQTSPS RPRAMNKALL FGNTLIIVMA LGLALAACDP ASPKAERKDA
PTRMTDRPVL VTAVRFEDDT RTRNFAATVR PSIESDLGFR VAGKVARRMV RNGDLVRKGQ
ALLVLDTNDL ELQREQAQAE VRAATTSLAQ AEADEKRVTE LQSKGWAAAA TLEKGRAAAE
EARSRLTRAQ RSVDLAAHAL DYATLEADAD GVITATPVEP GQVVAPGQVA VRLARLTEME
ALVALPETFV EQAKSAIPSL SLWSLPDRTY RVRLRELALA ADPATRTYAA RYSILDVDQA
VRLGMSATLT LSESIGVRAA RLPLTALFNH GQGPSVWVVD QDGKLTPRRV TTARYDDRSV
LITAGVSEGE TVVQLGVEKL DPGLTVRPIS ALAF
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